|
Name : Ppha_2401 (Ppha_2401) Accession : YP_002019207.1 Strain : Pelodictyon phaeoclathratiforme BU-1 Genome accession: NC_011060 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 2486113 - 2488233 bp Length : 2121 bp Strand : - Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGACTGGCGCCACGTCAATTGCCTACCTGAAAGGAGTTGGCACAAAAAAGGGAGCAATTCTCAGGGAGGCCGGTATGGT GACCCTTGATGACCTGTTCGATTATTTTCCTCGTCGTTATCTCGACCGGAGCGCCATGAAGAGCATCAGTAGCCTTGCGG ATGGTGAGACGGTGACGGTTGTTGGTACGGTGATCAAAACGCAGCTTGACGGAGACTCTCCCGGTCGGGCGCGTTTCAAG GCATGGCTTGGTGACCAGACGGGTGTGCTTGAACTGACCTGGTTCAGGGGTGTTCGCTATTTTTCCCGCAGCGTTGTTCA GGGAGATTCGCTTGCTGTTCATGGAAAGGTGAGCTATTTCGGCCATCATGCGCAGATGCAGCATCCCGATTATGATCGTC TCACTCCTGACCTTATTGAGTCTCGCAATGGGGAGTGCAGCGATTTTGAACTCTACAATACCGGTAAAATTATTCCGCTC TACCCGACAAACGAGGCGATGAAGCAGGCGGGTCTTGGTTCAAAGTCGTTGCGTACCCTTATTGCCCGTGCTTTTGAGCT GTGTACTCCGGGTAAAGAGGAAAATCTCACCTCCTCCATGCTTGCCGATAACAATCTGTTGCCGCTTGCGGAGGCTTATC GTGAAATGCACTTTCCCTCCTCGCATGAACAGCTCGCAAGGGCCCGTTACCGGATGAAGTGGACGGAACTGTTTTATGCC CAGCTTCTCTTTGCCCTGCGCCACAGTGAAATCAGGCGGAACCGGGCTGCGGTCAAGTTCACCCATTCCGGTGAGGTCAC CCAAAAGCTCTATGCAACTCTGCCCTTTGCATTGACCGAGGCGCAGAAAACGGCGGTTCGCGAGATCTATCGGGATCTCA GAAGCGGGAGTCCGATGAATCGCCTGTTGCAGGGTGACGTTGGTTCGGGAAAAACCATTGTGGCCATGTTTGCCATGGCT CTTGCTGTCGATAACGGATTGCAGGCAGCTTTTATGGCGCCTACTGAAATTCTGGCGGTGCAGCACTATCTGGTCATGAA GCGCTTGTTCAATCCACTCGGCCTGCAGGTTGGTCTCGTGACCGGCAGGCAGAGGAAAAAAGAGCGTCAGGAGGTACTGG CGGCGCTCGGTTCGGGCGAGTTGCATATCGCGGTGGGCACTCATGCCATGATTGAGCCGGGGGTGAGCTACGCCACTCTT GGTCTTGTTATTATTGATGAACAGCACCGCTTCGGGGTATTACAGCGCAAAGCTTTTCAGGAGAAGGCGATACACCCGCA TGTGCTGCTGATGACGGCGACACCGATACCGAGAACCCTTACCATGGGTGTTTTTGGTGATCTTGATGTTTCGGTTATCC GCCAGATGCCTGTCGGGCGGATACCGGTCAGGACTATTGTGCGCTCTGAAGAGGAGAAGGGGAAGGTTTATGATTTTCTC CGGGCTGAGATTGCGAAGGGACGGCAGGGTTATATTGTCTACCCTCTTGTTGAGGAGTCGGAAAAAATGGATCTGAAAGC TGCGGTTGAAAGTTATCAGGAGCTCTCTTCCACTCTTTTTGCGGATCTTCGTTCTGGGTTGATTCATGGTCAACTGAGCC CGGATGAAAAGGAGAGCGTGATGGAGCAGTTCCGGCGCGGAGAGATTGATCTGCTGGTGGGAACGACGGTGATTGAGGTT GGTGTAGATGTGCCGAATGCCACGGTCATGGTGATTGAACATGCCGAACGTTTCGGCCTTGCCCAATTGCATCAGCTCAG GGGAAGGGTTGGCCGGGGCGAGCATCGTTCAACCTGTTTTCTGCTCTATGCCAAAATGAGTGCGGATGCCCGCGAAAGGC TTTCGGCCATGGAGTCCACAACGGACGGCTTTCTTATTTCTGAAATTGATGCAAAAATAAGGGGGGCTGGAAATATTCTC GGAAAAGAACAGTCCGGAACACTGAGTGGATTAAGAGTTGCTGATCTCAACAAGGATTTTGATATCATGCAGTCGGCCCG TGCGGCGGCATTCAGGATTGTTGAAGAGGATGGCCAGTTGCGGAGTGCGGAGCATGTCATGATACGAGAGTGTTATGTCC GTCAATACCATGACCGGTTTACTCTGGCTGATATCGGGTAA Protein sequence : MTGATSIAYLKGVGTKKGAILREAGMVTLDDLFDYFPRRYLDRSAMKSISSLADGETVTVVGTVIKTQLDGDSPGRARFK AWLGDQTGVLELTWFRGVRYFSRSVVQGDSLAVHGKVSYFGHHAQMQHPDYDRLTPDLIESRNGECSDFELYNTGKIIPL YPTNEAMKQAGLGSKSLRTLIARAFELCTPGKEENLTSSMLADNNLLPLAEAYREMHFPSSHEQLARARYRMKWTELFYA QLLFALRHSEIRRNRAAVKFTHSGEVTQKLYATLPFALTEAQKTAVREIYRDLRSGSPMNRLLQGDVGSGKTIVAMFAMA LAVDNGLQAAFMAPTEILAVQHYLVMKRLFNPLGLQVGLVTGRQRKKERQEVLAALGSGELHIAVGTHAMIEPGVSYATL GLVIIDEQHRFGVLQRKAFQEKAIHPHVLLMTATPIPRTLTMGVFGDLDVSVIRQMPVGRIPVRTIVRSEEEKGKVYDFL RAEIAKGRQGYIVYPLVEESEKMDLKAAVESYQELSSTLFADLRSGLIHGQLSPDEKESVMEQFRRGEIDLLVGTTVIEV GVDVPNATVMVIEHAERFGLAQLHQLRGRVGRGEHRSTCFLLYAKMSADARERLSAMESTTDGFLISEIDAKIRGAGNIL GKEQSGTLSGLRVADLNKDFDIMQSARAAAFRIVEEDGQLRSAEHVMIRECYVRQYHDRFTLADIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 3e-101 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ppha_2401 | YP_002019207.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 6e-99 | 41 |
