Gene Information

Name : Ppha_0184 (Ppha_0184)
Accession : YP_002017139.1
Strain : Pelodictyon phaeoclathratiforme BU-1
Genome accession: NC_011060
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 179610 - 180536 bp
Length : 927 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1954 integrase, catalytic region

DNA sequence :
ATGAGTGTGCGCAGATGGTGGGTCAGCGACAAAGAGCCATTGCCGGTGGCAAAGCAATGCGTCCTTGTGTCCGTTAATCG
TTCGACGATATATTTGCCGTCTATCGTGTTGTTTCCTGATGCAGAAGACTTGCAGTTGCTTGAACTGATTGACAAGGAGT
ACACCAAGCATCCATTTTATGGTAGTCGTAAAATCATGCACTATCTTCGTAGCGAGGGTTACCAGATCAACCGGAAACGG
GTTCAGCGGCTTATGCGAAGGTTGGGTCTGGCCGGTATGGCACCGGGCCCCAACACCAGCAAACCGCATCCGGAGCACAA
GATCTACCCCTATCTCTTGCGGGGAGTTGATGTCACAAAACCCAACCAAGTCTGGTCGACTGACATCACCTATATTCGCC
TTCCAAAGGGCTTTATGTATCTGGTGGCAGTCATCGACTGGTATTCCCGGAAAGTACTCTCCTGGCGATTATCGAACTCG
ATGGAAAGCACCTTTTGCGTTGACTGTCTGCAAGAAGCGTTACGAAAATACGGGACACCCGATATCTTCAACACCGATCA
AGGCGCCCAGTTTACGAGTGCCGCCTTTGTCGGAGCGCTCACGGAGCACCCATCCATCAGTATTAGCATGGATGGACGTG
GCCGAGCACTGGACAACATCTTTGTCGAACGACTCTGGAGGAGTGTCAAATATGAGGATATATATCTCAAAGGTTACTCC
ACCGCAGCAGAATTACAGTGCGGATTAAAGGAATATTTTGTATTGTTCAACGTTGAAAGGCAGCATCAGTCGTTGGGCTA
CAGTACGCCAGATAAGGTTTACCGGACAGCCGTTGGAGGTGGTGCAAGAATAGTTGACAAGTATAACAAGAACAAGCAGA
CAGAAGAGTTAAAGGTAAAAGAGGGGCAGCGCCTTTCCGCTGCATGA

Protein sequence :
MSVRRWWVSDKEPLPVAKQCVLVSVNRSTIYLPSIVLFPDAEDLQLLELIDKEYTKHPFYGSRKIMHYLRSEGYQINRKR
VQRLMRRLGLAGMAPGPNTSKPHPEHKIYPYLLRGVDVTKPNQVWSTDITYIRLPKGFMYLVAVIDWYSRKVLSWRLSNS
MESTFCVDCLQEALRKYGTPDIFNTDQGAQFTSAAFVGALTEHPSISISMDGRGRALDNIFVERLWRSVKYEDIYLKGYS
TAAELQCGLKEYFVLFNVERQHQSLGYSTPDKVYRTAVGGGARIVDKYNKNKQTEELKVKEGQRLSAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABK1_0264 YP_005512836.1 insB Not tested AbaR4d Protein 2e-55 49
unnamed ACF06170.1 putative transposase Not tested Tn5036-like Protein 2e-63 48