|
Name : Ppha_1880 (Ppha_1880) Accession : YP_002018723.1 Strain : Pelodictyon phaeoclathratiforme BU-1 Genome accession: NC_011060 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1968596 - 1969522 bp Length : 927 bp Strand : - Note : PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1954 integrase, catalytic region DNA sequence : ATGAGTGTGCGCAGATGGTGGGTCAGCGACAAAGAGCCATTGCCGGTGGCAAAGCAATGCGTCCTTGTGTCCGTTAATCG TTCGACGATATATTTGCCGTCTATCGTGTTGTTTCCTGATGCAGAAGACTTGCAGTTGCTTGAACTGATTGACAAGGAGT ACACCAAGCATCCATTTTATGGTAGTCGTAAAATCATGCACTATCTTCGTAGCGAGGGTTACCAGATCAACCGGAAACGG GTTCAGCGGCTTATGCGAAGGTTGGGTCTGGCCGGTATGGCACCGGGCCCCAACACCAGCAAACCGCATCCGGAGCACAA GATCTACCCCTATCTCTTGCGGGGAGTTGATGTCACAAAACCCAACCAAGTCTGGTCGACTGACATCACCTATATTCGCC TTCCAAAGGGCTTTATGTATCTGGTGGCAGTCATCGACTGGTATTCCCGGAAAGTACTCTCCTGGCGATTATCGAACTCG ATGGAAAGCACCTTTTGCGTTGACTGTCTGCAAGAAGCGTTACGAAAATACGGGACACCCGATATCTTCAACACCGATCA AGGCGCCCAGTTTACGAGTGCCGCCTTTGTCGGAGCGCTCACGGAGCACCCATCCATCAGTATTAGCATGGATGGACGTG GCCGAGCACTGGACAACATCTTTGTCGAACGACTCTGGAGGAGTGTCAAATATGAGGATATATATCTCAAAGGTTACTCC ACCGCAGCAGAATTACAGTGCGGATTAAAGGAATATTTTGTATTGTTCAACGTTGAAAGGCAGCATCAGTCGTTGGGCTA CAGTACGCCAGATAAGGTTTACCGGACAGCCGTTGGAGGTGGTGCAAGAATAGTTGACAAGTATAACAAGAACAAGCAGA CAGAAGAGTTAAAGGTAAAAGAGGGGCAGCGCCTTTCCGCTGCATGA Protein sequence : MSVRRWWVSDKEPLPVAKQCVLVSVNRSTIYLPSIVLFPDAEDLQLLELIDKEYTKHPFYGSRKIMHYLRSEGYQINRKR VQRLMRRLGLAGMAPGPNTSKPHPEHKIYPYLLRGVDVTKPNQVWSTDITYIRLPKGFMYLVAVIDWYSRKVLSWRLSNS MESTFCVDCLQEALRKYGTPDIFNTDQGAQFTSAAFVGALTEHPSISISMDGRGRALDNIFVERLWRSVKYEDIYLKGYS TAAELQCGLKEYFVLFNVERQHQSLGYSTPDKVYRTAVGGGARIVDKYNKNKQTEELKVKEGQRLSAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ABK1_0264 | YP_005512836.1 | insB | Not tested | AbaR4d | Protein | 2e-55 | 49 |
| unnamed | ACF06170.1 | putative transposase | Not tested | Tn5036-like | Protein | 2e-63 | 48 |
