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Name : Ppha_1778 (Ppha_1778) Accession : YP_002018627.1 Strain : Pelodictyon phaeoclathratiforme BU-1 Genome accession: NC_011060 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1878240 - 1879874 bp Length : 1635 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGACGAACGTTACTGAAAACATAACTTGTCCGGTGAAGCGCATTGAGTGCATCCCGCCAGAAAAAATTTACTCAAAGGG CACTATTTTCCCGCTTGAGGTGGGAATGAAAAGAGTGAAACTGAGTAAAACCTACTTCTGCAATGGCCAGGAATTCTCCT CCTTACCGCTCTATGATACCGGTGGACCCTATTCTGATCCCTCTGTCAGCATTGACCCTGAAAAGGGACTTCCGCCCATA CGGAAGAGCTGGGGGTTTCAGCGCGATGAAAAAGCGGCTTCTTCCATAACTCAGATGCATTTTGCCCGAAAAGGGATCAT TACCCCGGAAATGGAATATGTTTCGATCAGAGAGAACCAGCAACTGGAGGAGTGGATCAGCTCATTTTCGAGAGGTGGCG CAAAGGTTTCGCCGATAACGCCGGAGTTTGTCCGCCAGGAGATCGCTGAAGGGCGGGCCATCATTCCTGCCAACATCAAC CATCCGGAGCTTGAACCGATGATTATTGGCCGGAAGTTCCGCGTCAAAATCAATGCCAATATCGGCAACTCCGCACTTGG TTCTTCGATTGAGGAAGAGGTGGAAAAGGCTGTCTGGTCATGCCGCTGGGGGGCTGATACCGTCATGGATCTCAGCACGG GCGCCAATATCCATCAAACACGCGAGTGGATTCTGAGAAACTCCCCTGTTCCGATCGGAACGGTTCCTATGTATCAGGCT CTTGAGAAGGCCGGGGGCAAAGCTGAAGCGCTGACATGGGAACTCTACCGCGACACGCTGATTGAACAGGCGGAACAGGG TGTTGACTACTTTACCATTCATGCCGGTATTCTGCTTGAGCATCTTCCCTTTGCTGAAAAACGGTTAACCGGTATTGTAT CACGGGGTGGCTCAATCATGGCAAAGTGGTGCAAGTACCATAAAGAGGAGAACTTTCTCTATACCCGGTTTGAAGAGATC TGCAAGATTCTGCAACGATATGACATCGCCGTTTCGCTTGGTGATGCCCTGCGTCCCGGCTCGATCATTGACGCCAACGA CGAGGCACAGTTTGGTGAACTCAAGGTGCTCGGAGAACTGACTAAAGTTGCATGGAAATATGAGGTACAGGTGATGATTG AGGGCCCAGGGCACGTTCCGCTGCACATGATCAGGGAGAACATGGATAAAGAGCTTGCGTATTGCCACGAAGCTCCCTTC TATACGCTTGGACCGCTGATTACCGATATTGCCGCCGGGTATGACCATATCAATTCAGCCATCGGTGGAGCGCTTATCGC CAGCTTTGGCTGTTCGATGCTCTGTTATGTCACCCCAAAGGAGCATCTTGGCCTGCCTGACCGTAATGATGTGCGTGAAG GGGTTATTGCCCACAAGGTTGCTGCGCATGGCGCCGATCTGGCAAAAGGTAATCCTGTTTCCTGGCTCCAGGATGAACTG ATGAGCAGGGCAAGATATTCATTTGCATGGGAAGATCAGTTCAACCTTTCGCTTGACCCGGAGAAAATCCGTGCAGTGCA TGCGCAAAGCATGGCTGCAAGAGGCCATACCGAAAAGAACCCTCATTTCTGCACCATGTGCGGACCTGATTTCTGTTCAA TGAAAAAGTCGAAGGAGGCTGCGGAGCAGGAGTAA Protein sequence : MTNVTENITCPVKRIECIPPEKIYSKGTIFPLEVGMKRVKLSKTYFCNGQEFSSLPLYDTGGPYSDPSVSIDPEKGLPPI RKSWGFQRDEKAASSITQMHFARKGIITPEMEYVSIRENQQLEEWISSFSRGGAKVSPITPEFVRQEIAEGRAIIPANIN HPELEPMIIGRKFRVKINANIGNSALGSSIEEEVEKAVWSCRWGADTVMDLSTGANIHQTREWILRNSPVPIGTVPMYQA LEKAGGKAEALTWELYRDTLIEQAEQGVDYFTIHAGILLEHLPFAEKRLTGIVSRGGSIMAKWCKYHKEENFLYTRFEEI CKILQRYDIAVSLGDALRPGSIIDANDEAQFGELKVLGELTKVAWKYEVQVMIEGPGHVPLHMIRENMDKELAYCHEAPF YTLGPLITDIAAGYDHINSAIGGALIASFGCSMLCYVTPKEHLGLPDRNDVREGVIAHKVAAHGADLAKGNPVSWLQDEL MSRARYSFAWEDQFNLSLDPEKIRAVHAQSMAARGHTEKNPHFCTMCGPDFCSMKKSKEAAEQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 8e-165 | 59 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 8e-165 | 59 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 3e-158 | 57 |
