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Name : Ppha_1748 (Ppha_1748) Accession : YP_002018598.1 Strain : Pelodictyon phaeoclathratiforme BU-1 Genome accession: NC_011060 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 1847028 - 1848041 bp Length : 1014 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cch:Cag_1182 capsul DNA sequence : ATGAATATACTCGTGACCGGCGCAGCCGGATTTATAGGATTTCATGTCTGCAAACGACTTCTGGAACGTGGAGAGAGGGT AACCGGGGTTGATAATCTCAATGATTATTATGATGTCACGCTCAAGGAGGCACGGCTGTCAATGCTTACGCCATTTGAAG GATTTACCTTTGTAAAAGCTGATATCTCCGACCGTGCTGCCATGGAAGAGCTGTTTGGGAAAGGGAAGTTCGATGGTGTG ATCAATCTTGCCGCACAGGCGGGTGTGCGCTATTCAATCCAGAATCCCCACTCCTATGTTGAAAGCAATATTGTGGGCTT CCTCAATATCCTCGAAGGATGCCGCCACAACGATGTGAAACATCTGGTTTATGCATCTTCCAGTTCCATATACGGTTCAA ATGAGACCATGCCTTTTTCGGTGCACGACAATGTCGATCATCCCCTTTCACTCTATGCCGCCAGCAAAAAGGCCAATGAG TTGATGGCGCATACCTACAGCCATCTCTACAATCTGCCAACAACCGGGCTGCGCTTTTTTACCGTTTACGGGCCGTGGGG AAGGCCTGATATGGCGCTCTTTCTCTTTACCAATGCCATCCTGAACAACAAGCCCATTCAGGTATTCAATTATGGCAAGC ATCGCCGTGATTTTACCTTCATTGATGATATTACCGAAGGAGTTCTGAGAACACTCGATCATGTTGCCGTGCCAAATCCC GACTGGTCAGGCCTCACTCCCGACCCTGGGACAAGCAAGGCGCCATGGAGAGTCTACAATATCGGCAACAGCAATCCGGT CGAACTCATGGACTATATCAAGGCTCTTGAAGAGCAGCTTGGCCGTACTGCCATAAAAGAGTTTCTCCCGCTCCAGCCCG GAGATGTGCCTGACACCTATGCCGACGTTGATCAGCTTATGCAGGATGTCCACTACAAACCTGAAACCACCGTGCCCGAG GGCATACGCCGTTTTGTTGCCTGGTATCGGGAGTACTATGGAGTTCAACAGTAA Protein sequence : MNILVTGAAGFIGFHVCKRLLERGERVTGVDNLNDYYDVTLKEARLSMLTPFEGFTFVKADISDRAAMEELFGKGKFDGV INLAAQAGVRYSIQNPHSYVESNIVGFLNILEGCRHNDVKHLVYASSSSIYGSNETMPFSVHDNVDHPLSLYAASKKANE LMAHTYSHLYNLPTTGLRFFTVYGPWGRPDMALFLFTNAILNNKPIQVFNYGKHRRDFTFIDDITEGVLRTLDHVAVPNP DWSGLTPDPGTSKAPWRVYNIGNSNPVELMDYIKALEEQLGRTAIKEFLPLQPGDVPDTYADVDQLMQDVHYKPETTVPE GIRRFVAWYREYYGVQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-102 | 60 |
