Gene Information

Name : Ppha_1328 (Ppha_1328)
Accession : YP_002018210.1
Strain : Pelodictyon phaeoclathratiforme BU-1
Genome accession: NC_011060
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1393953 - 1394687 bp
Length : 735 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_1243 ABC transporter related

DNA sequence : 
ATGCATACAAGAGGTATTATCATTGAGGGACTGAAAAAACAGTATGGAAGCGGTGACACCCTGGTGGATGCCTTGAAGGG
GGTTGAGATGCAGGTTGCTCTCGGAGAGGTTGTCGGGCTTGTTGGTCCTTCAGGATCGGGGAAAAGTACCTTGCTGAAAT
GTCTTGGGGCTGTAATCGAGCCTTCGGCTGGACGGATGAAGCTTGGGGAGACGATTATCTATGATGGAAAGTGGAAAATC
AAGGATTTGCGTGCGTTGCGGCGGGATAAGATAGGGTTTGTGTTTCAGGCGCCATATCTCATTCCCTTTCTTGACGTGAT
CGATAATGTGGCACTGCTGCCGATGCTTGCCGGTGAGGGTAACAGCATTGCCCGCAAAAGAGCCGTCGAGCTGCTTGAGG
CACTTGATGTCGGACATCGGGCGAAAGCCATGCCGTCACAGCTTTCCGGCGGTGAACAGCAGCGAGTGGCTATTGCCAGA
GCGCTTGTCAACCACCCTCCGGTAATTCTTGCTGATGAACCAACGGCTCCTCTCGACAGTCAGAGGGCGCTTGCCGTGAT
CGGTATTCTCAATGATATGGCTCGTCAGTATGAGACCGCCATTATCATTGTCACCCACGACGAAAAAATCATCCCCACCT
TCAAGCGGATCTATCATATTCGTGATGGCCGTACCCATGAAGAGGCAGGGGAGGGAAAATCACCCCGGGAACTGATTAAA
ACTGATAAGGCATGA

Protein sequence : 
MHTRGIIIEGLKKQYGSGDTLVDALKGVEMQVALGEVVGLVGPSGSGKSTLLKCLGAVIEPSAGRMKLGETIIYDGKWKI
KDLRALRRDKIGFVFQAPYLIPFLDVIDNVALLPMLAGEGNSIARKRAVELLEALDVGHRAKAMPSQLSGGEQQRVAIAR
ALVNHPPVILADEPTAPLDSQRALAVIGILNDMARQYETAIIIVTHDEKIIPTFKRIYHIRDGRTHEEAGEGKSPRELIK
TDKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ppha_1328 YP_002018210.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-36 44