Gene Information

Name : Ppha_1052 (Ppha_1052)
Accession : YP_002017951.1
Strain : Pelodictyon phaeoclathratiforme BU-1
Genome accession: NC_011060
Putative virulence/resistance : Unknown
Product : resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1084750 - 1085310 bp
Length : 561 bp
Strand : +
Note : PFAM: resolvase; KEGG: dsh:Dshi_4084 resolvase

DNA sequence :
ATGCTTATCGGTTATGCGCGTGTTTCCACCAAGGATCAGGACACCAAAGCACAAATTGCCGCGCTGGAATTTGGCGGATG
TGAAATGATCTTTCAAGAGAAAGCTTCCGGGGGCCGATGGGACAGGCCAGAATTGCATCGGTTGTTAGAGCAACTGCGCA
AGGACGATGTGGTGGTTGTCTGGAAGCTTGACCGTTTATCACGCTCTCTGAAAGATGTGTTGACTTTTATGGAGAAGATT
AATCAAGCAGGAGCTGGGTTTCGTAGTCTGACGGAAGTAATTGACACTACTTCGCCCGGTGGCCGCATGATGATGCAAAT
CGTAGGGACATTTGCGGAGTTCGAGCGGGCAATGCTTCGAGAGCGCACGCGCAACGGTTTGGATGCCGCACGCAAACAAG
GGCGTGTTGGAGGTCGCCGACCAAAGCTCACCTCAGAGCAACAGAAAGAGATCATCCATTTTGTTACGTCTGGACAGAAA
ACCGCAGCGGATGCAGCCAGGCTTTTTAATGTCCATCCAGCTACGGTATCAAGACTCATGAAGTTTACCAAAACTGCTTA
G

Protein sequence :
MLIGYARVSTKDQDTKAQIAALEFGGCEMIFQEKASGGRWDRPELHRLLEQLRKDDVVVVWKLDRLSRSLKDVLTFMEKI
NQAGAGFRSLTEVIDTTSPGGRMMMQIVGTFAEFERAMLRERTRNGLDAARKQGRVGGRRPKLTSEQQKEIIHFVTSGQK
TAADAARLFNVHPATVSRLMKFTKTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 2e-23 49
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 3e-23 49
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 3e-23 49
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 4e-24 46
res AGK06929.1 resolvase Not tested SGI1 Protein 4e-34 45
res AGK06966.1 resolvase Not tested SGI1 Protein 4e-34 45
res AGK07012.1 resolvase Not tested SGI1 Protein 4e-34 45
res AGK07070.1 resolvase Not tested SGI1 Protein 4e-34 45
res AAK02044.1 resolvase Not tested SGI1 Protein 4e-34 45
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 4e-34 45
res AGF34985.1 resolvase Not tested SGI1 Protein 4e-34 45
res AGF35025.1 resolvase Not tested SGI1 Protein 4e-34 45
res AGF35059.1 resolvase Not tested SGI1 Protein 4e-34 45
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 4e-25 44
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 2e-25 43
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 2e-25 43