Gene Information

Name : Paes_0727 (Paes_0727)
Accession : YP_002015421.1
Strain : Prosthecochloris aestuarii DSM 271
Genome accession: NC_011059
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 776117 - 777031 bp
Length : 915 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: cph:Cpha266_1769 tyrosine recombinase XerD

DNA sequence :
ATGACAAATCTGGAATTCCCCTACATTGACCACCTCGACAGTTTTCTCAACTACCTGACGCTTGAAAGAAACTTCTCGGT
CAATACAAGACAATCCTATACCAACGACCTCAGCCGTTACCTGCTCTACATGCAGCAGCAGCAAAAGGCTGTCGAATCAA
TCAAACTCGATGACATCAGAGAGTTTATCCATACCCTCTCAGCAACAGGCATGGAAGCTCGCTCGATAGCAAGAAACATT
TCAGCCATACGCTCACTGCACAAATTTCTCGTAGCCGAAAAAATCGTTCAGGTCAATGAAACCAACAATCTTCGTCAGCC
GAAACCGCTCAAAGCGCTGCCGAAAGTTCTTACGCACGACGAAGCCTTCAAACTGCTTGACGCCCCTCTGGCAAAGGACT
CATCAAGCCGTTATGCTCTTCGCGATAAAGCTATACTGGAATTTCTCTACGCAACCGGGGTGAGGGTCAGCGAACTGGTC
GACGTGTGCCAGAACAACTGTTTTCTTGATGAGGGATTCATTCGCATTTTCGGCAAAGGATCAAAAGAGCGTCTGGTCCC
GATAGGCTCCTCTGCTGTCTCCTGGATCAAACGATATCTGGATGAACTTCGAATGCGCATTGCCAACGATCGATCCGCTG
ACTTTCTTTTTCTCAATGCCAGAGGAGGCAGACTGACCAGAATGACGGTGTACAATATCGTGACCCACTACAGCCTCATT
GCAGGAATAAGCAAAACTATCAGCCCACATACACTTCGCCACACGTTTGCGACTCACCTGCTGGAAGGAGGTGCTGACCT
TCGCGCTGTTCAGGAAATGCTGGGTCACAGCTCCATTCTGGCCACGCAGATCTATACCCACATCGACCGAAGCTTCCTCT
GTGAAGTCCACAAGTCCTTCCATCCAAGAGGATAA

Protein sequence :
MTNLEFPYIDHLDSFLNYLTLERNFSVNTRQSYTNDLSRYLLYMQQQQKAVESIKLDDIREFIHTLSATGMEARSIARNI
SAIRSLHKFLVAEKIVQVNETNNLRQPKPLKALPKVLTHDEAFKLLDAPLAKDSSSRYALRDKAILEFLYATGVRVSELV
DVCQNNCFLDEGFIRIFGKGSKERLVPIGSSAVSWIKRYLDELRMRIANDRSADFLFLNARGGRLTRMTVYNIVTHYSLI
AGISKTISPHTLRHTFATHLLEGGADLRAVQEMLGHSSILATQIYTHIDRSFLCEVHKSFHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-46 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-46 42