Gene Information

Name : Paes_0330 (Paes_0330)
Accession : YP_002015034.1
Strain : Prosthecochloris aestuarii DSM 271
Genome accession: NC_011059
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 356332 - 358881 bp
Length : 2550 bp
Strand : +
Note : PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_0334 ATPase AAA-2 domain protein

DNA sequence :
ATGGAAGGAAATTTTTCAAATAGAGTACAGGATGTCATACGTCTTAGCAGGGAGGAGGCTCTCAGACTGGGACACGACTA
TATAGGTACCGAGCATTTTCTCCTCGGATTGATCAAGGAGGGTGAAGGTATCGCTGCCCGAATTCTGAGAAATCTCAGCA
TCGATCTTTTCAAGCTCAAAGAGAAAATAGAGGAGAGCACCCAGCAGAAAATCGCTTCGGCACAGATGGGTAACGTTCCT
TTGACAAAGCAGGCTGAAAAGGTTCTGAAAATAACCTATCTCGAAGCAAAGATCTGTAAGTCCAATATCATCGGCACAGA
GCATCTGCTGCTGTCGATCCTTAAGGGTGAGGATAATATCGCAGCCCAGATTCTTGAGCAGTTCGGCGTGACCTACGATA
CGGTTAAAGATGAATTGGTGACGATAACCGGGGGAAAGAGTGAATCGGGAGATCCTTCTATGGAAGGCGCTTTTTCGGGC
GGTTCGGAACGATCTCAGAAGAAAGCCGATCCGAAAAAAGGAGAACGCACCAAAACTCCTGTTCTTGATAATTTCGGACG
TGATATCACCCGGCTTGCGCTGGAGGATAAGCTCGATCCCATTATCGGCAGGGAGAAGGAGATTGAACGTGTCGCGCAGG
TCCTCAGCCGGCGTAAGAAGAATAATCCTGTCCTTATTGGTGAGCCGGGGGTGGGTAAGACTGCTATTGCCGAAGGGCTT
GCCCTGAAAATTGTTCAGCGTAAAGTTTCAAGGATTCTCTACGATAAGAGGGTTGTCGCTCTCGATCTTGCGGCTCTTGT
TGCCGGTACGAAATACCGGGGCCAGTTTGAAGAGCGTATGAAAGCGCTTATGAACGAGCTTGAGCGTTCACGTGATGTTA
TTCTCTTTATCGATGAGTTGCATACGATTATCGGAGCCGGCGGTGCATCGGGCTCTCTGGATGCAAGCAATATCTTCAAG
CCTGCGCTTGCCCGTGGCGAACTGCAGTGTATCGGTGCGACCACGCTCGACGAATATCGTCAGTATATCGAAAAAGACGG
CGCTCTGGACCGTCGTTTTCAGAAGATTATGGTTGAACCGACTTCGGTCGATGAGACTATTCAGATTCTCCACAATATCA
AGAGCAAATACGAGTCGCATCACCATGTGCATTTCGACGATAATGCTATCGAGAAAGCTGTTAAACTGGCTGAGCGTTAT
ATTACCGACCGTTATCTGCCCGATAAGGCTATCGATGTTATGGATGAGGCGGGAGCCCGAGTGCACCTGAGCAATATTCA
TGTGCCTCAGAATATTCTCGATCTTGAAAAAGCTATCGAAGAGGTCAAGGCGGAAAAAAACAAGGTTGTGCGTATGCAGA
ACTTTGAAGAAGCTGCCATGCTGCGCGACAAGGAAAAGAATCTTCTTGATTCGCTCGAAGATGCCAAGCAGGAGTGGGAG
GAGCAGGCGGCTGAAACCGTTTACGATGTAACGGAGACTGATATCTCTTCGGTGGTCGCGATGATGACCGGTATCCCTGT
TGTCAAGGTTGCACAGTCCGAATCACAGAAGCTGCTTAACATGGAAGATGCCCTCAGGAAAGAGGTTATCGGCCAGGATG
AGGCTATCAGGAAGATCACAAAGGCGATTCAGCGTACCAGGGCCGGCCTTAAGGATCCGATGCGCCCTATCGGTTCGTTT
ATTTTCCTCGGGCCTACTGGTGTCGGTAAGACTGAACTGGCAAAGGCGTTGACCAGGTATCTGTTCGATAGTGAGGACGC
GCTCATTCGTGCAGATATGAGTGAGTATATGGAGAAATTTTCGGTAAGCAGACTTGTTGGAGCTCCTCCCGGATATGTCG
GTTATGAAGAGGGAGGACAGTTGACAGAGAAAGTACGTCGTAAGCCCTATTCTGTTGTACTGATCGACGAGATAGAAAAA
GCTCATCCGGATGTTTTCAATATTCTTCTTCAGGTCCTTGACGAAGGGGTGTTGACCGATGGTCTCGGCCGGAAAGTCGA
TTTCCGAAATACGATTATTATCATGACCTCCAATATCGGAGCCAAGGATATCAAGAGCATCGGTGCAGGGATGGGCTTTT
CTCCCGGAGATGGCGGCGACAGCAGTTATAAATCGATGAAGTCAACGGTCGAGGATGCTTTGAAGAGAGTCTTTAATCCG
GAGTTCCTGAACCGTATCGATGATACGATCGTTTTCCATCAGCTTGAAAAGAAACATATCTTTGATATTATCGATATTAC
TTCCGGCAAACTCTTCAAGCGTCTCCATGAGATGGGTATCGATGTCGAAATTGAAGAGAAAGCCAAGGAGTTCCTTGTCG
ATAAAGGCTATGACCAGAAGTTCGGAGCCAGACCGCTGAAGCGTGCCTTGCAGCGTTATGTTGAGGATCCTCTGGCTGAA
GAGATGCTCAAAGGCAAGTTTTCCGAGGGAAGCAGGATCAAGATCACCTTTGATGAAAAGTCGGGTGAACTGAAGTTTAA
AAACGCTCGAAAAACAAAACGTCAGGAGCCCCTTGACGAGGAACTGACAGACGGAAAACCCGGTAATTAA

Protein sequence :
MEGNFSNRVQDVIRLSREEALRLGHDYIGTEHFLLGLIKEGEGIAARILRNLSIDLFKLKEKIEESTQQKIASAQMGNVP
LTKQAEKVLKITYLEAKICKSNIIGTEHLLLSILKGEDNIAAQILEQFGVTYDTVKDELVTITGGKSESGDPSMEGAFSG
GSERSQKKADPKKGERTKTPVLDNFGRDITRLALEDKLDPIIGREKEIERVAQVLSRRKKNNPVLIGEPGVGKTAIAEGL
ALKIVQRKVSRILYDKRVVALDLAALVAGTKYRGQFEERMKALMNELERSRDVILFIDELHTIIGAGGASGSLDASNIFK
PALARGELQCIGATTLDEYRQYIEKDGALDRRFQKIMVEPTSVDETIQILHNIKSKYESHHHVHFDDNAIEKAVKLAERY
ITDRYLPDKAIDVMDEAGARVHLSNIHVPQNILDLEKAIEEVKAEKNKVVRMQNFEEAAMLRDKEKNLLDSLEDAKQEWE
EQAAETVYDVTETDISSVVAMMTGIPVVKVAQSESQKLLNMEDALRKEVIGQDEAIRKITKAIQRTRAGLKDPMRPIGSF
IFLGPTGVGKTELAKALTRYLFDSEDALIRADMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLIDEIEK
AHPDVFNILLQVLDEGVLTDGLGRKVDFRNTIIIMTSNIGAKDIKSIGAGMGFSPGDGGDSSYKSMKSTVEDALKRVFNP
EFLNRIDDTIVFHQLEKKHIFDIIDITSGKLFKRLHEMGIDVEIEEKAKEFLVDKGYDQKFGARPLKRALQRYVEDPLAE
EMLKGKFSEGSRIKITFDEKSGELKFKNARKTKRQEPLDEELTDGKPGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Paes_0330 YP_002015034.1 ATPase AAA VFG0079 Protein 0.0 54
Paes_0330 YP_002015034.1 ATPase AAA VFG0080 Protein 1e-142 51