|
Name : Paes_2200 (Paes_2200) Accession : YP_002016849.1 Strain : Prosthecochloris aestuarii DSM 271 Genome accession: NC_011059 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 2373075 - 2374349 bp Length : 1275 bp Strand : - Note : PFAM: UMUC domain protein DNA-repair protein; KEGG: pvi:Cvib_0129 DNA-directed DNA polymerase DNA sequence : ATGTTCGCTCTGGTTGACTGCAATAATTTTTACGCTTCGTGCGAGCGGGTGTTCAATCCGGCGCTTGTCGGGCGGCCGGT CGTTGTGCTGTCGAACAACGACGGGTGCGTTATTGCCCGTTCAGAGGAGGCGAAGGTCCTGGGGATCGGGATGGGCGCCC CGGAGTTCAAGTGCCGCGAACTGCTGCTGCGCCACGGGGTTGCTGTCTTTTCATCCAACTATCCGCTCTATGGCGATATG TCTTCGCGGGTGATGACGACGCTGGCAGGTTTTGCGCCGTCGATCGAGGTGTATTCGATCGACGAATCTTTTCTCGATCT CAGCGGTTTCGGGCGCTTTGACCTTGAGCGCTACGGGAGCGAGATCCGAAGGACAGTACGGAGGCATACCGGTATTCCTG TGGGGGTCGGGATTGCCGCAACCAAAACGCTTGCCAAGATTGCCAACCGGATTGCCAAGAAGCACCTGGAGTATGATGGG GTATGCGTGCTTGAGCGCGATGCGGAGATTCAGCGTGCGCTGAAGCTGATCGCGGTTGGTGATATCTGGGGCGTCGGACG GCAGTGGGCGAGTTTCCTGCAGACGAACGGTATTGGTACGGCAGCTGATTTTGCCGCTGCATCGCCCGCCTGGATCAGGC AGCATATGCATGTGACCGGGGCACGGGTTCAGGCTGAGCTGAACGGGCACTCATGTCTGGCTCTGGAAGCGGTGAGGCCG GTGAAGAAAAGCATCTGCACCTCCCGCTCGTTCGGGCGGACGGTGAGATCGAAAGAGGATCTGCGACAGGCGGTGGCGAC CTTTGCCGGACGGTGCGCTCTCAAGCTGCGCCGTGAAGGTCTCCGAACTTCGCTTGTTACGGTCTTTGCCGCAACGAGCC GTTTCAATCACGAGAGCGAGCGCTACTGGGGGACGAGAACTCTTGCTCTGCAGGAGCCGTCGCAGGATTCCATTGTCCTG CTCAACGCCGCGGAGCAGCTGCTCGATGCACTCTATCAGCCCGGCTATGAGTACCGGAAAGCGGGCGTTCTCCTCGCCGG TCTGAACCCTGCAGACGCTCCCGGAGCAGCGCTGTCACTGTTTCCTGAAGCTCCTTGCACTCGTGACGGGCAGCACCGTA AACTCATGCAGATTATGGACGCCGTCAACCGGCGTTACGGCCACGGCACCATCCATCTCGCAGCAGAAGAGACCGAAGCA TGGAAACCCCTGCAGAAACGGCTTTCGCCACGTTACACCACCCGGTGGTCGGAGATTCTGGAGGTTCATAGCTGA Protein sequence : MFALVDCNNFYASCERVFNPALVGRPVVVLSNNDGCVIARSEEAKVLGIGMGAPEFKCRELLLRHGVAVFSSNYPLYGDM SSRVMTTLAGFAPSIEVYSIDESFLDLSGFGRFDLERYGSEIRRTVRRHTGIPVGVGIAATKTLAKIANRIAKKHLEYDG VCVLERDAEIQRALKLIAVGDIWGVGRQWASFLQTNGIGTAADFAAASPAWIRQHMHVTGARVQAELNGHSCLALEAVRP VKKSICTSRSFGRTVRSKEDLRQAVATFAGRCALKLRREGLRTSLVTVFAATSRFNHESERYWGTRTLALQEPSQDSIVL LNAAEQLLDALYQPGYEYRKAGVLLAGLNPADAPGAALSLFPEAPCTRDGQHRKLMQIMDAVNRRYGHGTIHLAAEETEA WKPLQKRLSPRYTTRWSEILEVHS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 3e-66 | 44 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 3e-66 | 44 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 4e-52 | 43 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 2e-70 | 42 |
