Gene Information

Name : Paes_1904 (Paes_1904)
Accession : YP_002016563.1
Strain : Prosthecochloris aestuarii DSM 271
Genome accession: NC_011059
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 2081128 - 2083134 bp
Length : 2007 bp
Strand : +
Note : TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: cph:Cpha266_2148 transketolase

DNA sequence :
ATGCAACAAGATCCTATCGATACCCTTTCCATCAATACCATTCGTCTGCTTGCCGCAGACATGGTCGAAAAAGCCGGATC
CGGGCACCCCGGTATGCCAATGGGGGCCGCCCCCATGGCCTATGTTCTCTGGACAAAAATCATGAAACACAATCCCCGGG
ATCCGCATTGGCTGAACCGTGACCGTTTCGTCCTGTCCGCAGGTCACGGTTCAGCCCTGCTCTACTCGCTTCTCCACCTC
TGCGGCTATGAGCTGACCATGGAGGACCTGCAGCAGTTCCGGCAGTGGCAGAGCAGAACTCCGGGGCACCCTGAATACCG
CCATACCCCCGGTGTTGAAATGACGACAGGACCGCTCGGTCAGGGCATAGCAACCGCTGTCGGCATGGCTGTCGCCGAAC
GGTTTTCTGCTGAACGCCTGAACCGTCAGAGCTTCAATATTATTGATTATCATACCTATGTCATCTGCGGAGACGGCGAT
CTTATGGAAGGCCTCTCTTCCGAAGCAGCCTCCATTGCCGGCCATCTCAAGCTCGAAAAACTGATCTGCCTCTATGACGA
CAACAGGATCTCCATCGAAGGCCCGACCAGCCTCGCATTCACTGAAAATGTCGGCAAACGGTTCGAGGCTTTCGGCTGGA
ATGTTCTGGACGTTGACGGTAACGATCCCGAGGCGGTCGAAGAGGCGTTGCGGAAAGTCAGAAAAGGAACAGGCAAACCA
AACCTGATCAGGGCAACCACCAACATCGGCTATGGAAGCCCGAACAAACAGGACAATGCTGCATCCCATGGATCGCCGCT
GGGAAAAGAGGAACTTGCCATGGTCAGGAAAAAATTCGGTTTTCCCGAAGATGAATCATTCGTCATTCCTGAAGCGGTAA
CCGCTCATATGCGAGCTATCAGCGATAAAGGAGAACAGAGCCAGGCTGAGTGGACAACACTGTGGGAAGCATATAGCCAA
GCCCATCCTGATCTGGCAACCCAGATCAACGACCTTATCAATAAACGTCTGCCGGACTCCTGGCAGACGCTTCTTCCCGA
ATTCAACCCGGAAGAACAGCTCGCCACGCGCCAGGCACTCAATAAAATCCTGCATGCTCTGATTGGCAAAATCCCTTTCC
TTGCAGGCGGTTCGGCCGATCTGGCCCCATCGAACGGGACAGCAGTCAAAAACGCTGAGGATTTCAATCCCGACAATTAC
GGCGGCACAAATTTCCACTTTGGCGTCAGAGAACATGCCATGGGCGCGATCATCAACGGCATGGCGCTTTCAGGAATGCT
CAAGCCCTACGGAGCGACATTCCTGGTCTTTGCAGACTATATGAAACCTGCCCTGAGACTTGCGGCACTGATGCAGATCC
CTTCAACATTTATTTTCACCCATGACAGCATTGCTGTTGGTGAAGACGGGCCGACACACCAGCCGATCGAACAGCTGGTC
ATGCTGCGATCAATTCCTGGTATGACAGTCATCAGACCTGCTGATGCCAATGAAACGAAAGCTGCATGGAAATATATCAT
GACAGCACAGACCCCGGTATCACTGATACTCTCTCGCCAGGCCCTTCCCATACTCGACAGCAGCCTCTACCCCTCTGAAG
AAGGAACAGCCAGAGGAGGCTATATTCTGGCTGATTGGGGAAACGCTTCAGGCAGCGGATCCAAGCCGGTTATCCTCATC
GCAACAGGGGCAGAAGTCCACCTGGCAGTGCAGGCACAGCAACAACTTGAAGAAGAAGGCATTCCTGCCCGCGTGATATC
GATGCCATCAGTCGAACTCTTCCTGCAGCAGCCCGAAGAATATCGAGAAGAAGTCCTGCCGACCTCAATACGCAGAAGAG
TCGTTATCGAAGCAGCCTCAACTATCGGCTGGCACCGCTTTATCACTGAGGAAGGAACGATTGTGGGTATCGACAGGTTC
GGCTCTTCGGCTCCGGGAAGCAGAGTGCTCAAGGAGTACGGATTCACGGCAGAGCATATTGTAGCGACAGTAAAAACCCT
TCTCTGA

Protein sequence :
MQQDPIDTLSINTIRLLAADMVEKAGSGHPGMPMGAAPMAYVLWTKIMKHNPRDPHWLNRDRFVLSAGHGSALLYSLLHL
CGYELTMEDLQQFRQWQSRTPGHPEYRHTPGVEMTTGPLGQGIATAVGMAVAERFSAERLNRQSFNIIDYHTYVICGDGD
LMEGLSSEAASIAGHLKLEKLICLYDDNRISIEGPTSLAFTENVGKRFEAFGWNVLDVDGNDPEAVEEALRKVRKGTGKP
NLIRATTNIGYGSPNKQDNAASHGSPLGKEELAMVRKKFGFPEDESFVIPEAVTAHMRAISDKGEQSQAEWTTLWEAYSQ
AHPDLATQINDLINKRLPDSWQTLLPEFNPEEQLATRQALNKILHALIGKIPFLAGGSADLAPSNGTAVKNAEDFNPDNY
GGTNFHFGVREHAMGAIINGMALSGMLKPYGATFLVFADYMKPALRLAALMQIPSTFIFTHDSIAVGEDGPTHQPIEQLV
MLRSIPGMTVIRPADANETKAAWKYIMTAQTPVSLILSRQALPILDSSLYPSEEGTARGGYILADWGNASGSGSKPVILI
ATGAEVHLAVQAQQQLEEEGIPARVISMPSVELFLQQPEEYREEVLPTSIRRRVVIEAASTIGWHRFITEEGTIVGIDRF
GSSAPGSRVLKEYGFTAEHIVATVKTLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 4e-135 48
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-140 47