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Name : NGK_1994 (NGK_1994) Accession : YP_002002619.1 Strain : Neisseria gonorrhoeae NCCP11945 Genome accession: NC_011035 Putative virulence/resistance : Unknown Product : protein TspB2 Function : - COG functional category : A : RNA processing and modification COG ID : COG5186 EC number : - Position : 1654914 - 1656503 bp Length : 1590 bp Strand : - Note : - DNA sequence : ATGAATTCGTTTATCAAGAGTACACCGATAGTTCTGATTTTAATTCTATGTTCGAGTAATTCTTATTCTGAACCTGTAAG ATTAGAAAAATCACAAATTAAATTTCAATCAAGTAATAATTTAAAATCAATTGGTTTTAAATTAGATTCAAGTTCTAACA CTTTTTCCAAATTCACAGAAGCGGCAAATTTCGAGCACATCCCCACGGGCGCAAAAGCCCGAATCAACGCCAAAATAACC GCCAGCGTATCCCGCGCCGGCGTATTGTCGGGGGTCGGCAAACTTGTCCGCCAAGGCGCGAAATTCGGCACAAGGGCGGT TCCCTATGTCGGAACAGCCCTTTTAGCCCACGACGTATACGAAACTTTCAAAGAAGACATAAAGGCACGAGGCTGCCGAT ACGATCCCGAAACCGACAAATTTGTAAAAGGCTACGAATATGCTAATTGCCTTTGGTACGAAGACGAAAGACGTATTAAT AGAACCTATGGCTGCTACGGCGTTGACAGTTCGATTATGCGCCTTATGCCCGATCGCAGCAGATTCCCCGAAGTCAAACA ACTGATGGAAAGTCAAATGGAAAGGATTGCTCGTCCTTTTTGGGATAAACGGAAAGAAGAAATTCCTAAAGATACTGCTT TAAAGTGGCGTCTTTTTCCTTTTAGTCATTGTGAATTTTTTTGGAACGGCGGCGGTTGTTTTGTACGTAACGGTGATAAT TTAATTCATCGAGTTTATTTTAAACTTGAACGCAATCCGAAATACAAAGAAGAAATGGATGCCAAAAAGCCGGAAGAGAT TTTATCGTTGAAAGTCGATGCCGATCCCGACAAATACATAAAGGCAACCGGATATCCCGGTTATTCCGAAAAAGTAGAAG TCGCACCCGGAACAAAAGTGAATATGGGGCCCGTCACGGACAGGAACGGGAATCCCGTTCAGGTTGCCGCAACATTCGGC AGGGACGCGCAAGGCAACACCACGGCGGATGTACAAGTAATCCCGCGTCCCGACCTCACGCCCGCAAGCGCGGAAGCACC TCACGCACAGCCGCCGCCCGAAGTATCGCCCGCGGAAAACCCCGCAAACAACCCGGACCCCGATGAGAACCCCGGCACGC GTCCCAATCCCGAACCCGATCCCGATTTGAATCCCGATGCAAATCCCGATACGGACGGACAGCCCGGAACAAGCCCCGAT TCCCCGGCCGTTCCGGACCGCCCAAACGGCAGGCATCGCAAAGAAAGGAAAGAAGGCGAAGACGGCGGGCTTTCGTGCGA TTATTTTCCGGAAATCCTAGCCTGTCAGGAGATGGGCAAACCTTCGGACCGCATGTTTCACGATATAAGCATACCGCAGG TTACAGACGATAAAACATGGTCTTCACATAACTTTTTACCGTCTAACGGCGTATGTCCGCAGCCGAAAACCTTTCATGTT TTCGGCAGGCAATATCGGGCAAGCTATGAACCGTTGTGCGTGTTTGCCGAAAAAATCCGTTTTGCCGTACTGCTCGCCTT TATCATTATGTCGGCTTTTGTCGTTTTCGGTTCGTTGGGGGGGAATAAATGCCATTACTTGCCGGCCTGA Protein sequence : MNSFIKSTPIVLILILCSSNSYSEPVRLEKSQIKFQSSNNLKSIGFKLDSSSNTFSKFTEAANFEHIPTGAKARINAKIT ASVSRAGVLSGVGKLVRQGAKFGTRAVPYVGTALLAHDVYETFKEDIKARGCRYDPETDKFVKGYEYANCLWYEDERRIN RTYGCYGVDSSIMRLMPDRSRFPEVKQLMESQMERIARPFWDKRKEEIPKDTALKWRLFPFSHCEFFWNGGGCFVRNGDN LIHRVYFKLERNPKYKEEMDAKKPEEILSLKVDADPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVAATFG RDAQGNTTADVQVIPRPDLTPASAEAPHAQPPPEVSPAENPANNPDPDENPGTRPNPEPDPDLNPDANPDTDGQPGTSPD SPAVPDRPNGRHRKERKEGEDGGLSCDYFPEILACQEMGKPSDRMFHDISIPQVTDDKTWSSHNFLPSNGVCPQPKTFHV FGRQYRASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLGGNKCHYLPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB1747 | NP_274748.1 | tspB protein | Not tested | IHT-C | Protein | 2e-165 | 82 |
| tspB | YP_001598322.1 | TspB protein | Not tested | MDA | Protein | 2e-117 | 70 |
