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Name : NGK_1090 (NGK_1090) Accession : YP_002001715.1 Strain : Neisseria gonorrhoeae NCCP11945 Genome accession: NC_011035 Putative virulence/resistance : Unknown Product : protein TraD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3505 EC number : - Position : 890396 - 892438 bp Length : 2043 bp Strand : + Note : - DNA sequence : ATGAGTGCCCACTTCCCTGAAAACGTTTATCGATCACCCTATGAATGGATCAGTGTAGCCGCATACTCCACCACAGCGGT TTCAGTAGCACATTTGCCCGTACCTCCGACAATTGCTTATGGCAGTTTAGCTATTTTTTCGTTGGTTTCAGTCAAACGTG CGTTATCAGCATTACGCATTATGCGTTTCCGTAAAAATATTCGGAAGTTGCCCTATTATGCCCTTACTGCCGATGAAATT CCTTCTTCTAATAAAGCTCTTTTTCTTGGGAAAGGTTTTAGATGGACACAGACACATACCCAACGTCTTTTTATGGTTCG CCAGCCTGAGAACGACGGACTTCGTAACCCCTCAAAACTCTATAAGGCAGCGCGAAAACATGAGATTGAGACAATGGGTA CAGACTGGATTTCCCGCATAACTCGGAAATCGGCATGGTGGAATCCGGTTGCTCCCTTACCTCCGGTCGGAGGTTCTCCT GAATTACATGGCATTGAAATTGAGGAAGATGATATTTGGGAAGATTTGGGGGAGCGTGTTGGCCACAAGGTTGTATTGGG CACAACCCGCGTTGGTAAAACCCGATTATGCGAAACCATGATTGTTCAGGATATTCGGCGGGGGGATGTTACGATCGCAT TTGATCCAAAGGGTGACGCTGACCTGATGACTAGAATGTATGTCGAATCGCAAAAATCAAACAGGCCGTTTTATATGTTC CATTTGGGTTTCCCCGAGTACAGTTGCCGGTACAACCCTATCGGGGATTATGGCCGTATTACCGAGGTGGCGACAAGGAT TGCAAACCAACTGCCTTCTGAAGGTCAGTCTGCTGCTTTCCGAGATTTTGTATGGCGTTTCGTCAACGTTTTAACGAAAA CCATGGAAGGTTTATCCATTAAACCAAGCTATGAAAATATCTATAAGTCTGCTGCAAATGTAGATGAACTTGCAGGGGAT TACTTTAAAAAGATATTAGATAAACACCACCCTGGTTGGGAGAAAGACTTCGACAATTTTGATATGCCCGAGTCTGAAGC AAAAAGCGCAGTCAAAACTGGGCGCAACTTGGACACAATGAAGCTCGGTTCTTTCTTGAAGGCCAAAAAGCATAACGAAC CTCTTATTGACGCATTGGGTGGTATTTTGTCCAATGACAGATCCTATTTTGAGAAGCTAGTCAGCTCCCTGTATCCATTG CTGGAAAAACTGACGACTGGCGAAGTTGCCAAGCTTATCAGCCCGGATACAGAGGATTTGTCAGATCCAAGAATCATTAT GGACTGGCGCAAAGTCATGGAATCGAATGCCGTCGTCTATATTGGATTGGATTCCCTATCTGATGCCGAAGTTGCAGCAG CCGTTGGTAATGCGATGTTTGCTGACTTAACCTCTCTTGCGGGTCAGATCTATAAATTCGGCCATGGGGTTGGACAGAGT GGAAAAACCCAGAAAAGAAAAGTCTCAATTCATGCAGACGAATTCAATGAATTAATCGGTGACGAATTCATTCCGTTATT GAATAAGGCCGGTGGTGCCGGCTACCAAGTGACGGTTTATACACAAACCTGGAAAGACGTAGAAGCCAAAATTGGTTCCC CTGCTAAAGCAGGTCAAATTGGCGGCAACTTGAATACGATGATTATGCTTAGGGTGAAAACTGTCGAAACAGCAGAGATG CTGACGAATCAGTTGCCGGAAGTCAAAATTATGACCAGCACTCTAGTCTCAAGGGCTGGTGATGTTGCCTTCCCTGATAG TCACGAAGATTTTAGCAGTGGAAACGAAGACAGGATTGGTGCTGAGACAGTTCCTATGCTGACACCCGCCGATTTAACCC AATTACCCAAAGGTCAAGCATTCGCGCTTATTGAAGGTGGCCAGCTATATAAAATTCGACTCCCTCTACCCAAAAAGGAC AAGCAGGAGGAAATCCCTGCGCATATTGGAGAAATGGCGGCTGATATGCGCGAAGTTTACAGACTAAGCCGGCCTTCGGC TGAAGAAAACGCATTTACGGAGGGAAGTAGTTATGCCGTCTAA Protein sequence : MSAHFPENVYRSPYEWISVAAYSTTAVSVAHLPVPPTIAYGSLAIFSLVSVKRALSALRIMRFRKNIRKLPYYALTADEI PSSNKALFLGKGFRWTQTHTQRLFMVRQPENDGLRNPSKLYKAARKHEIETMGTDWISRITRKSAWWNPVAPLPPVGGSP ELHGIEIEEDDIWEDLGERVGHKVVLGTTRVGKTRLCETMIVQDIRRGDVTIAFDPKGDADLMTRMYVESQKSNRPFYMF HLGFPEYSCRYNPIGDYGRITEVATRIANQLPSEGQSAAFRDFVWRFVNVLTKTMEGLSIKPSYENIYKSAANVDELAGD YFKKILDKHHPGWEKDFDNFDMPESEAKSAVKTGRNLDTMKLGSFLKAKKHNEPLIDALGGILSNDRSYFEKLVSSLYPL LEKLTTGEVAKLISPDTEDLSDPRIIMDWRKVMESNAVVYIGLDSLSDAEVAAAVGNAMFADLTSLAGQIYKFGHGVGQS GKTQKRKVSIHADEFNELIGDEFIPLLNKAGGAGYQVTVYTQTWKDVEAKIGSPAKAGQIGGNLNTMIMLRVKTVETAEM LTNQLPEVKIMTSTLVSRAGDVAFPDSHEDFSSGNEDRIGAETVPMLTPADLTQLPKGQAFALIEGGQLYKIRLPLPKKD KQEEIPAHIGEMAADMREVYRLSRPSAEENAFTEGSSYAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| traD | AAW83057.1 | TraD | Not tested | GGI | Protein | 0.0 | 99 |
| YE3493 | YP_001007651.1 | TraG-family protein | Not tested | YAPI | Protein | 7e-150 | 50 |
| api27 | CAF28501.1 | hypothetical protein | Not tested | YAPI | Protein | 8e-148 | 50 |
| YpsIP31758_3718 | YP_001402672.1 | hypothetical protein | Not tested | YAPI | Protein | 4e-149 | 50 |
| EXA47 | ABD94656.1 | TraG/TraD family protein | Not tested | ExoU island A | Protein | 4e-141 | 50 |
| unnamed | ABR13375.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 3e-141 | 50 |
| STY4562 | NP_458648.1 | hypothetical protein | Not tested | SPI-7 | Protein | 5e-149 | 49 |
| t4260 | NP_807858.1 | hypothetical protein | Not tested | SPI-7 | Protein | 5e-149 | 49 |
| traG | CAI36113.1 | putative TraG family conjugative protein | Not tested | PPHGI-1 | Protein | 9e-141 | 49 |
| ORF SG68 | AAN62290.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 3e-143 | 49 |
| ORF C65 | AAN62159.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 1e-139 | 49 |
| RL047 | AAP84173.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 3e-140 | 49 |
| PMI2588 | YP_002152307.1 | plasmid transfer protein | Not tested | Not named | Protein | 2e-141 | 48 |
| Pmu_03190 | YP_005176218.1 | conjugal transfer protein TraD | Not tested | ICEPmu1 | Protein | 9e-138 | 48 |
