Gene Information

Name : Cpar_0619 (Cpar_0619)
Accession : YP_001998239.1
Strain : Chlorobaculum parvum NCIB 8327
Genome accession: NC_011027
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 662498 - 663412 bp
Length : 915 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: cte:CT0602 integrase/recombinase XerD

DNA sequence :
ATGCCCGCACTTCAAGAACCGTGGCGCGGAACGCTCGATACCTTTCTGAACTACCTCACCATCGAGCGCAACTTTTCAGG
CAACACCAGAGAGTCTTACCTGAACGACCTCGGACGCTACCTCGCCCATTTGCAGGGGCAACAGGTGAAGCCCGAAGAAG
CCACGCCCGACCACATCCGGCAGTTCATCGAAGAATTGCACGACATTGGCCTCGAAGCAAGCTCGGTTGCACGAAACATC
TCGGCCATCCGCTCATACCACAAGTTCCTGCTCGCCGAGCGAATCGCGCAAGCCAATCCTGCCGAAAATATCCACCAGCC
AAAACTCGCGCGCACCCTGCCCTCGGTGTTGACCGTCGAGGAGATGATGGCACTGCTCGAAGCCCCGCTCAGGCGACACC
CGCCCGGCAGCTTCATGCTGCGCGACAAAGCGATGCTCGAACTGCTCTACGCCACCGGCATCCGGGTCAGCGAACTGATC
GGTCTGGGCAAATTGAATTTGTATCTGGATGAGGGATTCATCAGGGTCTTCGGCAAAGGCTCCAAAGAGCGGCTTGTGCC
TGTGGGAAGAAACGCCACGAAATGGCTCAAGCGCTATCTTGAAGAGCTTCGACCCGGCATGGTCAGCGCAACGTCGAAGG
ATGTGCTCTTTCTGAACTCACGCGGCGGCAAACTCTCGCGCATGTCCGCGTGGAACATCGTGCGCCAGCACGCCATCATC
GCCGGCATCGAAAAGCCGATCAGCCCGCACACCTTCCGCCACTCCTTCGCAACCCACCTGCTCGAAGGCGGGGCTGACCT
GCGCGCCGTTCAGGAGATGCTCGGCCACAGCTCCATCATCGCCACCCAGATCTACACCCACATCGACCGCTCGTTCGTCA
AGGAAGTACACAGAACATTCCACCCGAGAGGGTAA

Protein sequence :
MPALQEPWRGTLDTFLNYLTIERNFSGNTRESYLNDLGRYLAHLQGQQVKPEEATPDHIRQFIEELHDIGLEASSVARNI
SAIRSYHKFLLAERIAQANPAENIHQPKLARTLPSVLTVEEMMALLEAPLRRHPPGSFMLRDKAMLELLYATGIRVSELI
GLGKLNLYLDEGFIRVFGKGSKERLVPVGRNATKWLKRYLEELRPGMVSATSKDVLFLNSRGGKLSRMSAWNIVRQHAII
AGIEKPISPHTFRHSFATHLLEGGADLRAVQEMLGHSSIIATQIYTHIDRSFVKEVHRTFHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-53 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-53 44