Gene Information

Name : Cpar_0451 (Cpar_0451)
Accession : YP_001998073.1
Strain : Chlorobaculum parvum NCIB 8327
Genome accession: NC_011027
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 481366 - 482082 bp
Length : 717 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT0455 ABC transporter, ATP-binding protein

DNA sequence : 
ATGGCCGAACCTATTCTCAGACTCAAAGGTATCCGCAGGGAACTCGAACTCTCGAAGGATGTTCGCCAGACGATCATTCC
CAATCTTTCGCTCGACATCTTCAAGGGTGAGTTCGTGGCCATTACCGGGCCGTCCGGTTCGGGCAAATCCACGCTGCTCT
ACATCATGGGCGGGCTCGACAAGCCGACCTTTGGCGAGGTGTGGCTCGACGGGCAGGAGATCACCGCTATCAGCGAGGCC
GAGATGACCGTCATCCGCAACGAAAAGATCGGTTTCATCTACCAGTTCCACTTCCTGCTTCCAGAGTTCAATTCGCTTGA
AAACGTGATGATGCCGATGCTGATTCAGCGCAGGTTCAGCAAGAAGGAGATTCGAGACCGGGCCAAACACCTGCTCGACA
TGGTGGGTCTCGAAAACAAATACACCAACAAGCCCAGCCAGCTCTCCGGCGGCCAGCAGCAGCGTGTCGCTATCGCTCGG
GCGCTGGCAAATGAGCCGAAGGTGTTGCTCGGCGACGAGCCGACCGGCAACCTCGATTCGCGCTCGGCCAACAACGTCTA
TGAGCTGTTCGACCGCCTGAACCGTGAGCTGAACCAGACCGTCATTGTTGTCACGCACGACGAGGATTTCGCCAACCGCG
CGGGCCGCCGCATTCACCTTGTTGACGGCAAAATCGAAAGCGACACCAACGGTTCCCGGCGCTCGGCTTCGGCGTGA

Protein sequence : 
MAEPILRLKGIRRELELSKDVRQTIIPNLSLDIFKGEFVAITGPSGSGKSTLLYIMGGLDKPTFGEVWLDGQEITAISEA
EMTVIRNEKIGFIYQFHFLLPEFNSLENVMMPMLIQRRFSKKEIRDRAKHLLDMVGLENKYTNKPSQLSGGQQQRVAIAR
ALANEPKVLLGDEPTGNLDSRSANNVYELFDRLNRELNQTVIVVTHDEDFANRAGRRIHLVDGKIESDTNGSRRSASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-30 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 7e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cpar_0451 YP_001998073.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-38 48
Cpar_0451 YP_001998073.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-33 45
Cpar_0451 YP_001998073.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-33 44
Cpar_0451 YP_001998073.1 ABC transporter-like protein CP001581.1.gene598.p Protein 3e-34 42