|
Name : Cpar_0384 (Cpar_0384) Accession : YP_001998007.1 Strain : Chlorobaculum parvum NCIB 8327 Genome accession: NC_011027 Putative virulence/resistance : Unknown Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 407480 - 409612 bp Length : 2133 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGCCCTCATCGTCAGTCCCAATTTCATCGTTGCAGAGCATCAAGGGGGTCGGGCCGAAGCGCGCGGCAGTTCTGGCGGA GGCGGGTATCCGGTCGGTTGCCGACCTGTACGACTATTTTCCGCGCCGCTACCTCGACCGCACCGTCATCCGGCGTATTG CCCAGCTTCGCGACGGCGAGTCGGTGACGGTGGTGGGCACGGTGACCGGCACGCGGCTCGAAGGCGGGGGGCGCGGACGG GGGCGCTTCAAGGCGACCGTTAGTGACGGTTCGGGCGTGCTGGAGCTGACCTGGTTCCGGTCGGTGCACTACTTTTCAAA AAGCATCCACAGCGGCGACATGCTTGCCGTGCATGGCCGCGTGAGTTTTTTCGGGCGCACGCCGGGGATGCAGCACCCCG ACTACGACCGGCTCGGCGGCAGCGGAGAAGATGGCCGCGCGGAGGGGTCGGCGGACGGCGAGCTGTACAAAACCGGCGGC ATCATTCCGCTCTACCCGACAAGCGACGCCATGAAGCAAGGCGGCGTCAATTCGGGGACGCTCCGTGCGATCGTACATCG GGCGTTCCGCGACCAGCCGCCGCGCATCACAGAATATCTCACTCCTGAAATCATGGAGGCGTACGGGCTGATGCCCATCG GCGAGGCGTACCGGCAACTCCATTTTCCCGATTCCGCCGAGCTGCTCGAACGGGCGCGCTACCGCATGAAGTGGAGCGAG CTTTTTTTCGCACAGCTCTTTTTCGCCCTGCGCCGCACCGAGGAGCGCCGGAGCCTCACCTCGGCGCGATTCGAGCGCTC GGGCGACAAGACTGCCGGGCTGCACGAACGGTTGCCGTTCGAGATGACCGGCGACCAGAAACGCGCCGTCAAGGAGATTT ACCACGACCTGCGCAGCGGCCACCAGATGAACCGCCTGGTGCAGGGCGACGTCGGTTCGGGCAAGACGCTCGTGGCGCAG TTCGCGATGACGCTCGCCGTGGACAACGGTTTGCAGGCGGCCTTTATGGCGCCGACCGAAATCCTCGCCTTCCAGCACTA CATCGGCCTGAAGCAGGTGCTCGAACCGCTCGGCGTGACGGTTGCGCTGCTGACCGGTCGCCAGAAGAAAAAGCTGCGCG AGGAGCAGCTTGCCCGGCTCGAAAGCGGCGAAATCGACATCGCGGTCGGCACGCACGCCATCATCGAGGCCGGGGTGCGG TTCCGGCGGCTCGGGCTGGCGATCATCGACGAGCAGCACCGCTTCGGCGTGATGCAGCGCAAGGCGTTGCAGGACAAGGC CGAGAATCCGCACGTGCTGCTCATGACCGCCACACCGATTCCGCGCACGCTGACGATGGGCATCTACGGCGACCTCGACG TGTCGATCATCGCTGAAATGCCCGCCGGACGCCAGCCGATCCAGACGCGACTCTGCCGCGAAGATCAAAAACCGGAGCTT TATCGTCTCTTGCGGAAGCAAATTGCCGAGGGGCGGCAGGCGTACATCGTCTATCCGCTGGTCGAAGAGTCGGAGAAGAT GGATCTGAAGGCGGCTACCGAGAGCTACGAGCAGCTCCGGGGCGAAGTGTTTCCGGAGTTGCGTTTGGGGCTGATCCACG GCAAGCTCCCGGCTGAGGAGAAGGAGGCGGTGATGGCGGCATTCCGCAGCGGCGAACTCGACATCCTTGTCGGCACGACC GTGATCGAGGTCGGCGTCGATGTGCCCAACGCCACGGTGATGGTGATCGAGCACGCTGAGCGGTTCGGCATTTCGCAGCT CCATCAGCTTCGCGGGCGCGTGGGGCGCGGCACGCATCGCTCCTCGTGCTACCTCGTCTATGCCAAAATGGCTGGCGACG CCAAGGAGCGGTTGCAGGCGATGGCTGCGACCAACGACGGATTCCGGCTCTCAGAGATCGACCTCCAGCTTCGCGGCGCA GGCAACATGCTCGGCCGCGAGCAGTCGGGCACGGCGAGCAGTCTCAGAATCGCCGACCTGATGACCGACGGCGAGATCAT GCGCTCCGCGCGTGCGGCGGCGTTCGAGTTGGTCGAAAAGGATGAAACGCTTTCGCATCCCGAACACGCTCGGCTCCGCG ACTACTACCACACCCACTTCCGGAAGCGCATCTCGCTCGCCGACGTGGGGTGA Protein sequence : MPSSSVPISSLQSIKGVGPKRAAVLAEAGIRSVADLYDYFPRRYLDRTVIRRIAQLRDGESVTVVGTVTGTRLEGGGRGR GRFKATVSDGSGVLELTWFRSVHYFSKSIHSGDMLAVHGRVSFFGRTPGMQHPDYDRLGGSGEDGRAEGSADGELYKTGG IIPLYPTSDAMKQGGVNSGTLRAIVHRAFRDQPPRITEYLTPEIMEAYGLMPIGEAYRQLHFPDSAELLERARYRMKWSE LFFAQLFFALRRTEERRSLTSARFERSGDKTAGLHERLPFEMTGDQKRAVKEIYHDLRSGHQMNRLVQGDVGSGKTLVAQ FAMTLAVDNGLQAAFMAPTEILAFQHYIGLKQVLEPLGVTVALLTGRQKKKLREEQLARLESGEIDIAVGTHAIIEAGVR FRRLGLAIIDEQHRFGVMQRKALQDKAENPHVLLMTATPIPRTLTMGIYGDLDVSIIAEMPAGRQPIQTRLCREDQKPEL YRLLRKQIAEGRQAYIVYPLVEESEKMDLKAATESYEQLRGEVFPELRLGLIHGKLPAEEKEAVMAAFRSGELDILVGTT VIEVGVDVPNATVMVIEHAERFGISQLHQLRGRVGRGTHRSSCYLVYAKMAGDAKERLQAMAATNDGFRLSEIDLQLRGA GNMLGREQSGTASSLRIADLMTDGEIMRSARAAAFELVEKDETLSHPEHARLRDYYHTHFRKRISLADVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-95 | 42 |
