Gene Information

Name : Cpar_0372 (Cpar_0372)
Accession : YP_001997996.1
Strain : Chlorobaculum parvum NCIB 8327
Genome accession: NC_011027
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 398331 - 399077 bp
Length : 747 bp
Strand : +
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence :
ATGAACGTCGTCATCGTCATCCCCGCGCGTCTCTCATCCAACCGCCTGAAAGAAAAAATGCTGGCCGATCTGGAAGGCGC
TCCGCTGATCGTGCGCACCTGGCAGCAGGCGATGAAGTCGCGCCTTGCCAACCGTGTGGTGGTGGCGACCGACAGCGAGC
GCATTTTCGCGGTGCTGCGTGACGCCGGGGCCGAGGTGGTGATGACCTCGCCCGACCTCACCTGTGGCACCGACCGCATC
GCCGAGGCCGCCGAGCAGGTCGGTGGCGACGTCTTCGTCAATCTCCAGGGCGACGAGCCGCTCATCGACCCGGCGACCAT
CGACCTCGCCATCGCGCCTTTCTTTGAAGATGGTCCGATGCCAGACTGCACCACGCTGGTCTTCCCGCTGAAGCCGGATG
AGCGGCACATCATCGACGACCCACACGTCGTCAAGGCTGTGCTCGACGCCAAAGGCAATGCGCTCTACTTCTCCCGCTGC
CCGATACCCTATCGCCGCGAAACCCTGCCCGACACCCGCTATTATCGTCACATCGGCCTCTACGCTTTCCGTGCCGACGT
GCTCAAAGCGTTCGTCGCACTTCCCCCCTCGATGCTCGAACGCACCGAATCCCTCGAACAGCTTCGCCTGCTCGAAAACG
GCTACCGCATCCGCTGCATCGAAACGACAACGGATACGCCGGGCGTCAATACCGAGGAGGAGCTGGAAGAGGTAAGGAGG
TTGTTCAGGGAAAGGTTTGGTTCGTAA

Protein sequence :
MNVVIVIPARLSSNRLKEKMLADLEGAPLIVRTWQQAMKSRLANRVVVATDSERIFAVLRDAGAEVVMTSPDLTCGTDRI
AEAAEQVGGDVFVNLQGDEPLIDPATIDLAIAPFFEDGPMPDCTTLVFPLKPDERHIIDDPHVVKAVLDAKGNALYFSRC
PIPYRRETLPDTRYYRHIGLYAFRADVLKAFVALPPSMLERTESLEQLRLLENGYRIRCIETTTDTPGVNTEEELEEVRR
LFRERFGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 6e-39 42
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 9e-39 42
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 5e-39 41