Gene Information

Name : Cpar_1802 (Cpar_1802)
Accession : YP_001999394.1
Strain : Chlorobaculum parvum NCIB 8327
Genome accession: NC_011027
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 1972828 - 1973880 bp
Length : 1053 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cte:CT0230 NAD-dependent epimerase/dehydratase family protein

DNA sequence :
GTGAAAATACTTGTTACCGGCACGGCCGGATTCATCGGCTTCCACCTTGCCGAACGCCTTGCTCAGAGAGGCGACGAAGT
GGTCGGTCTCGACAACATCAACGACTATTACGACCAGAACGTCAAGTACGGACGGCTCGCATTCTCAGGCATAGACCGCG
ATGCCATCGAAGAGGGCAAACTCGTTACCTCGACAAAGTATCCGAACTACCGCTTTATCAAGCTCGATCTCGAAGACAAG
GCCGCAATTGACGCGCTGTTCGCCGCCGAGCAGTTCGACGCAGTCTGCAACCTTGCGGCACAGGCCGGGGTGCGCTACTC
GCTGACCAACCCCGACGCCTACATCAAGTCGAACATCACCGGCTTCATCAATCTGCTCGAAGCATGCCGCCACAACAAGG
TCGGCAACCTCAGCTACGCATCGAGCTCGTCGGTGTACGGCCTGAACGAACGCCAGCCTTTTTCGGTGCACCACAATGTC
GATCACCCGGTGAGCCTGTACGCGGCCAGCAAGAAGTCCAACGAGCTGATGGCGCACACCTACAGCCACCTGTTCGGCAT
CCCGACCACCGGCCTGCGCTTCTTCACGGTCTACGGGCCGTGGGGACGGCCAGACATGGCGCTGTTCCTGTTCACCAAAG
CCGCGCTCGAAGGCCGCCCGATCGACGTCTTCAACTACGGCAATATGCAGCGCGACTTCACCTACATCGATGACATCATC
GAAGGCGTGGTACGCGTTATCGACAATCCGGCCAAATCGAATCCAAACTGGAGTGGCCAGAACCCCGATCCCGGCACTTC
GTCGGCCCCGTACCGCGTTTACAACATCGGCAACAACGAGCCGGTCAGGCTGTTGGATTTCATCGAGGCCATTGAAAAAG
CGCTCGGCAAAACCATCGAAAAGAACATGCTGCCAATCCAGCCGGGCGACGTTCCCTCGACCTACGCCGACGTCACCGAC
CTGGTCGAAGAGCTTGGCTACAGACCTGCCACACCGGTTCAGGAGGGCATCAACCGCTTCGTTGCCTGGTACCGTGAATT
CTTCAACGTCTGA

Protein sequence :
MKILVTGTAGFIGFHLAERLAQRGDEVVGLDNINDYYDQNVKYGRLAFSGIDRDAIEEGKLVTSTKYPNYRFIKLDLEDK
AAIDALFAAEQFDAVCNLAAQAGVRYSLTNPDAYIKSNITGFINLLEACRHNKVGNLSYASSSSVYGLNERQPFSVHHNV
DHPVSLYAASKKSNELMAHTYSHLFGIPTTGLRFFTVYGPWGRPDMALFLFTKAALEGRPIDVFNYGNMQRDFTYIDDII
EGVVRVIDNPAKSNPNWSGQNPDPGTSSAPYRVYNIGNNEPVRLLDFIEAIEKALGKTIEKNMLPIQPGDVPSTYADVTD
LVEELGYRPATPVQEGINRFVAWYREFFNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-97 58