Gene Information

Name : Cpar_1724 (Cpar_1724)
Accession : YP_001999316.1
Strain : Chlorobaculum parvum NCIB 8327
Genome accession: NC_011027
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 1886271 - 1887440 bp
Length : 1170 bp
Strand : -
Note : KEGG: vpa:VP0236 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP

DNA sequence : 
ATGAAAATTGCCATTGCCGGAACCGGTTACGTCGGTTTGTCCATCGCCTGCCTTCTGGCCCAGCATCATGAAGTTGTTGC
TCTGGACATCGTTCCCGAGAAGGTCGAGCTGATCAATAATCGCAAGTCACCGATTGTCGATTCGGAGATCGAGGATTTTC
TCGCGAACAAAGAGCTGAACCTCAGGGCGACGCTGGATAAGGAGGACGCTTATTCCGGTGCGGATTTTGTGGTGATTGCC
ACGCCGACCGATTACGATCCCGAGAGCAACTATTTCAATACCCGCTCGGTCGAATCGGTGATTCGTGATGTTATGGCGAT
CAATCCGAAGGCGGTGATGGTTATCAAATCAACCATTCCAGTTGGCTATACGGCCAAGACCCGGCAAGAGATGGGGTGTG
ACAATCTGCTCTTTTCACCGGAGTTCCTGCGCGAAGGCAAGGCACTGCACGACAACCTCTATCCGTCGCGCATCATCGTC
GGCGAGCGTTCGGAGCGGGCGGAGACGTTTGCCAATCTTCTGCGCGAAGGGGCGCTCAAGGAGGATATTCCGGTGTTGTT
CACCGACAGCACGGAGGCCGAAGCGGTCAAGCTTTTTTCCAATACCTACCTGGCGATGCGTGTGGCCTATTTCAACGAGC
TGGACACCTACGCCGCGACGCATGGCCTGGATACGCGACACATCATCGAAGGCGTTGGGCTTGATCCGCGCATCGGGTCG
CACTACAACAACCCTTCGTTCGGTTATGGCGGCTACTGCCTCCCGAAAGACACCAAGCAGCTGCTGGCTAATTATCGGGA
TGTGCCGCAGAATCTGATTCATGCCATCGTCGAGTCCAATACCACGCGCAAGGATTTCATTGCCGACAGCATTATCCAGC
GGAACCCGAAGGTGGTCGGTGTCTATCGCCTCATCATGAAGGCGGGCTCGGACAATTTCCGCGCTTCGAGTATTCAGGGT
ATCATGAAGCGCATCAAGGCCAAAGGCATCGAGGTGATCATTTACGAACCGGTGATGGAGGAAACCGAGTTTTACCACTC
ACGCGTGCTCAATGATCTGGAGGCGTTCAAGCAGGAGTCGGATGTCATTATTGCCAATCGTATGACTTCCGATCTTGAAG
ATGTTACTGACAAGGTGTATACCCGCGATTTGTTCGGTCACGATGCCTGA

Protein sequence : 
MKIAIAGTGYVGLSIACLLAQHHEVVALDIVPEKVELINNRKSPIVDSEIEDFLANKELNLRATLDKEDAYSGADFVVIA
TPTDYDPESNYFNTRSVESVIRDVMAINPKAVMVIKSTIPVGYTAKTRQEMGCDNLLFSPEFLREGKALHDNLYPSRIIV
GERSERAETFANLLREGALKEDIPVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDTYAATHGLDTRHIIEGVGLDPRIGS
HYNNPSFGYGGYCLPKDTKQLLANYRDVPQNLIHAIVESNTTRKDFIADSIIQRNPKVVGVYRLIMKAGSDNFRASSIQG
IMKRIKAKGIEVIIYEPVMEETEFYHSRVLNDLEAFKQESDVIIANRMTSDLEDVTDKVYTRDLFGHDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 4e-93 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cpar_1724 YP_001999316.1 nucleotide sugar dehydrogenase VFG0963 Protein 4e-104 56