Gene Information

Name : Cpar_1166 (Cpar_1166)
Accession : YP_001998772.1
Strain : Chlorobaculum parvum NCIB 8327
Genome accession: NC_011027
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1281678 - 1282397 bp
Length : 720 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT0953 ABC transporter, ATP-binding protein

DNA sequence : 
ATGATCGATCAAGCGCATCAATCCGTTCTTACCGTCGATGGGGTGTCGAAAAGTTACCTGATGGGTGAGGTGACCGTCAA
GGCTCTGCACGACATTTCGCTCGATTTCGGGGCAGGCCAGCTCGTGGTGCTGCTCGGCGCGTCGGGCAGCGGGAAATCGA
CGCTGCTCAACATTGTCGGCGGCCTCGACGTGCCCGATACCGGCAAAGTCACCTTCCGGGGCAAGGACATCAACGCTTCG
GGCGAGGAGGGCTTGACCGCCTACCGCCGCCGCTCCATCGGCTTCGTCTTCCAGTTTTACAACCTCATCTCAAGCCTCTC
GGCGCTCGAAAACGTGCAGCTCGTGACCGAGCTCGTCGAAAATCCCATGCCGCCAGACGAAGCGTTGCGCCTCGTCGGCC
TTGGCGACCGCATTAACCATTTCCCATCCCAGCTTTCCGGTGGCGAGCAGCAGCGCGTCGCCATCGCCCGCGCGGTCGCC
AAACGCCCGGAACTGCTGCTCTGCGACGAACCCACCGGCGCGCTCGACTACACTACTGGCAAGCTCGTGCTGGAAGTGAT
TGAAAAAGTCAACCGCGAACTCGGCACCACCACGCTCGTCATCACGCACAATGTTTCCATCGCGGGCATGGCAGACCGGG
TTATTACGTTGCGAAGTGGGGAGGTGATTGAGGATCGGCGGAATGAAGAGAAGATTTCGCCTTCGGAGTTGTCGTGGTGA

Protein sequence : 
MIDQAHQSVLTVDGVSKSYLMGEVTVKALHDISLDFGAGQLVVLLGASGSGKSTLLNIVGGLDVPDTGKVTFRGKDINAS
GEEGLTAYRRRSIGFVFQFYNLISSLSALENVQLVTELVENPMPPDEALRLVGLGDRINHFPSQLSGGEQQRVAIARAVA
KRPELLLCDEPTGALDYTTGKLVLEVIEKVNRELGTTTLVITHNVSIAGMADRVITLRSGEVIEDRRNEEKISPSELSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cpar_1166 YP_001998772.1 ABC transporter-like protein NC_012469.1.7685735. Protein 1e-52 51
Cpar_1166 YP_001998772.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-38 45
Cpar_1166 YP_001998772.1 ABC transporter-like protein NC_008702.1.4606598. Protein 8e-31 42
Cpar_1166 YP_001998772.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-37 41