Gene Information

Name : Ctha_0612 (Ctha_0612)
Accession : YP_001995529.1
Strain : Chloroherpeton thalassium ATCC 35110
Genome accession: NC_011026
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : 2.4.2.4
Position : 718510 - 719817 bp
Length : 1308 bp
Strand : -
Note : KEGG: gtn:GTNG_2243 pyrimidine nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like

DNA sequence :
ATGAATCCGGTTGAACTGATTAGAAAAAAACGCGACGGCCAGCCGCTCAAAGCCGAAGAAATTCAGGAATTTTTTTCTGC
CTATCAACAAGGAAAAATCGCAGACTATCAAGTTTCTGCGATGTTGATGGCCATGTTTTTTCGTCCGCTAAATCAGGTGG
AAACGCGCGCGCTTTGCCATACCATGATTCACAGTGGAAAAGTGCTCGAGCTTTCGGCTATCAGGCTTCCGAAAATAGAT
AAACATTCCACAGGCGGCGTTGGCGACAAAACTTCGCTCATTCTTGCGCCAATTTTAGCCAGCCTTGATGTGGCCGTTCC
CATGATTTCCGGTCGTGGACTTGGACACACGGGCGGCACGTTGGATAAGCTTGAATCCATTCCCGGGTTTCGCGTTTCGC
TTGCTGCGGGTGAATTTCAAGCTCAGCTTCAGCGCTTGCACTGCGCGCTGATTGGACAAACCGAAGAGATTGCGCCGCTC
GATAAATTGCTTTACGCTTTGCGAGATGTGACCGCAACGGTGGAATCCATTCCGTTGATTGCGGCGAGCATCATGTCAAA
AAAAATCGCGTCGGGTTTGGACGGGCTCGTGCTGGATGTGAAAACCGGCTCTGGGGCGTTTATGCCCACGCTTGAAAAAT
CGCGCGAGCTTGCCAAAACGCTCAAAGAGATTGGCGAAGGCTATGGGAAAAAAGTCATGGCGTTCATCACCGATATGAAT
GAGCCGCTTGGCTTTGCGGTTGGAAACTGGCTTGAAGTTCAGGAATGCGTAGACTGCTTAAAAGGTGAAAAAGTGCGCGA
CTTAATGGACGTTTCGCTGGCGCTTTCGGGGGCGATGCTGTTGCTTGCTCAAAAATGCGAGTCGCTTGAAGCGGGCATGT
TGCTTGCGGAAAAGCAAGTTCAGAATGGCAAGGCATTGGCCAAATTTTTAGAAATTGTTGAAGCGCAAGGGGGCGATCGT
TCCGTTTTAGAAGATGGCTCGCGCTATCCAAAATCGCGTTTTTGCGCCGCGCTTCACGCTGATAAATCTGGATGGATTTC
ACAAATCGATGCGCGCGAAGTTGGTCTGTGCTCCACTTTGCTCGGTGCGGGAAGGCTGCGCAAAGAAGACGCAATCGATC
CAAAAGCGGGCATTCGATTTCATCAAAAAATTGGCGATCGCGTTCAAGCCGGACAGATAATTTTGGAAATATTTACCGAT
CGAGAAGTTTCCGTTCAGCCCGTCTTAGCGCAGCTGAACGCCGCGATTCAGATTTCGCCGGAACACGTTCAAACAAGCGG
GAAAAAGGTTTTGGAAATGATCGGATGA

Protein sequence :
MNPVELIRKKRDGQPLKAEEIQEFFSAYQQGKIADYQVSAMLMAMFFRPLNQVETRALCHTMIHSGKVLELSAIRLPKID
KHSTGGVGDKTSLILAPILASLDVAVPMISGRGLGHTGGTLDKLESIPGFRVSLAAGEFQAQLQRLHCALIGQTEEIAPL
DKLLYALRDVTATVESIPLIAASIMSKKIASGLDGLVLDVKTGSGAFMPTLEKSRELAKTLKEIGEGYGKKVMAFITDMN
EPLGFAVGNWLEVQECVDCLKGEKVRDLMDVSLALSGAMLLLAQKCESLEAGMLLAEKQVQNGKALAKFLEIVEAQGGDR
SVLEDGSRYPKSRFCAALHADKSGWISQIDAREVGLCSTLLGAGRLRKEDAIDPKAGIRFHQKIGDRVQAGQIILEIFTD
REVSVQPVLAQLNAAIQISPEHVQTSGKKVLEMIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 3e-65 42