Gene Information

Name : Ctha_0588 (Ctha_0588)
Accession : YP_001995506.1
Strain : Chloroherpeton thalassium ATCC 35110
Genome accession: NC_011026
Putative virulence/resistance : Virulence
Product : family 2 glycosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 687204 - 688127 bp
Length : 924 bp
Strand : -
Note : PFAM: glycosyl transferase family 2; KEGG: chu:CHU_2681 candidate b-glycosyltransferase, glycosyltransferase family 2 protein

DNA sequence :
ATGGACATTTCTGTGATCATCCCTGTTTTCAACGAAGAAAAAAATATTCCGCTGCTTTATGCTCGCCTCAACGATACGGT
TCGGAAAATTTGCACAACCTACGAATACATTTTTGTCAATGATGGCAGCGCGGATGCGTCGATGCAGGTGATTCGGTCGC
TTGCCGAAACGGACGACTCGGTGAAGTTTATTGATTTTAGCCGCAATTTCGGCCATCAAATTGCCGTGACCGCCGGGCTT
GCAAAAGCCAAAGGGCAAGCCGTTGTGATTATCGATGCCGATTTGCAAGATCCGCCCGAACTGATTGAGCCGCTATATCG
CAAAATGCAAGCGGGTTACGAAGTGGTGTATGCCAAGCGCCGCAGCCGCGAGGGCGAAAGTTTTATGAAAAAATGGACGG
CGAAAATGTTTTATCGCCTCCTCTCTCGAATGACCGCCATTTCCATTCCGCTCGACACCGGCGATTACCGCATCATCCAT
CAAAAAGTCGTGCAAATGCTGAACCGAATGCCCGAACAGCAAAAATTCATTCGCGGGCAAATTGCGTGGGTCGGATTTCG
CCAAACATTTCTTGAATACGACCGGCAAGCGCGGCACGCCGGCACCACCGGATACAGCTACGCCAAAATGCTCAAGTTCG
CCATCGATGGCATTACTTCGTTTTCCGATGTGCCGCTCAAGTTTGCGACCATTTCCGGCTTTGTGGTTTCGGGTGTGGCG
TTCATTGAAATTTTATATGCGTTGCATAGCCGATTAATTACCAAAGATTATGAACCCGGCTGGGCGTCGATTTTAATCAG
CATTTTGTTTTTGGGCGGCATTCAACTGATGAGCATTGGCATTATCGGCGAATACTTAAGCCGCATTAGCACGAATGTAA
AAAATCGCCCGCTGTATGTCATCAACGAAACCAATATCGAATAG

Protein sequence :
MDISVIIPVFNEEKNIPLLYARLNDTVRKICTTYEYIFVNDGSADASMQVIRSLAETDDSVKFIDFSRNFGHQIAVTAGL
AKAKGQAVVIIDADLQDPPELIEPLYRKMQAGYEVVYAKRRSREGESFMKKWTAKMFYRLLSRMTAISIPLDTGDYRIIH
QKVVQMLNRMPEQQKFIRGQIAWVGFRQTFLEYDRQARHAGTTGYSYAKMLKFAIDGITSFSDVPLKFATISGFVVSGVA
FIEILYALHSRLITKDYEPGWASILISILFLGGIQLMSIGIIGEYLSRISTNVKNRPLYVINETNIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 2e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ctha_0588 YP_001995506.1 family 2 glycosyl transferase VFG0670 Protein 1e-40 41