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Name : Ctha_0562 (Ctha_0562) Accession : YP_001995480.1 Strain : Chloroherpeton thalassium ATCC 35110 Genome accession: NC_011026 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 660440 - 661723 bp Length : 1284 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATATAAAATACGTTCGTGAAAATCCCGATGCGGTCAAAAAAATGCTCGAAATGCGGCTTCTCGCAAGTGAGAG CAAAAAAATAGATGAACTCATTCGCTACGATAGCGAGCGCAAAGCCAAAGTCACTGAAAGCGACACATTGAAGGCAATGC GAAACAGCGTGACGCAGGAAATTGCCAAAATTAAGCGCGAAAAAACCGGCTCGGCAGATGAGCTAATCGCCGAGATGAAA ATCGTCTCCGATAGAATTTCCGAAATCGACGCCGAGCTTCGCGAAATAGAAACCAAGCAGGAGGAACTGCTTTTGGCTGT TCCGAACATCTTGCACGAGAGCGTGCCCGAAGGCAAATCGGCGGCGGATAATGTGGTGTATAAAGAGGTCATGGACTGTA AGCGCGAGTTTGATTTCAAGCCGAAAGATCACATCGAGCTTGGCAAATCGCTCGGCATGCTGGACTTTGAGCGCGGAGCG AAAATTGCGGGCGCGGGATTTCCGCTCTACATCGGCAAGGGTGCGTCGCTCGAGCGAGCGTTGATTAACTTCATGCTCGA TTTACATTTGGAAAAGCACGGTTACAAGGAAGTTTTTCCGCCGTTTTTCGTCAATCGTGATTCGCTGCGCGGCACGGGGC AATGGCCGAAGTTTGCCGATCAAGTCTATTACATGAACGACGACGACATTTACGCCATTCCGACCGCCGAAGTGCCGGTC ACAAATATGCACCGCGACGAAATGCTTCAGTCCAAAGAGTTGCCGATAAAATACGCGGCGTATTCGGCCTGTTTCCGACG CGAAGCTGGTAGCTACGGCAAGGACACAAAGGGCTTTTTGCGCGTGCATCAGTTCAACAAGGTGGAAATGGTGAAATTCG TTTTGCCCGAAACCTCTTACGACGAGCTGGAAGCTTTGCTCGGCGACGCGGAAGATGTGCTGAAAGCGTTGGAAATTCCG TATCGCGTGCTCTTGTTGTGCAGCGGCGACATCAGCGCGAATGCCGCAAAATGTTACGACATTGAGGTTTGGTCGCCTGC CGAAGAGAAGTTTTTGGAAGCCTCGAGCTGCTCGAACTTTGAGGATTATCAAGCACGCCGCGCCCAGATTCGTTTCCGTC GCCAGCCGAAAGCTAAACCGGAATTCGTGCATACGCTGAACGGCTCGGGACTTGCAACTTCGCGCCTGATGGTCTCGCTC ATGGAAAATTATCAAACGCCGGATGGCAAAATCCAAGTGCCGAAAGTGCTGCAAAAATACATGGGCTGCGAGGTGATTGG GTAA Protein sequence : MLDIKYVRENPDAVKKMLEMRLLASESKKIDELIRYDSERKAKVTESDTLKAMRNSVTQEIAKIKREKTGSADELIAEMK IVSDRISEIDAELREIETKQEELLLAVPNILHESVPEGKSAADNVVYKEVMDCKREFDFKPKDHIELGKSLGMLDFERGA KIAGAGFPLYIGKGASLERALINFMLDLHLEKHGYKEVFPPFFVNRDSLRGTGQWPKFADQVYYMNDDDIYAIPTAEVPV TNMHRDEMLQSKELPIKYAAYSACFRREAGSYGKDTKGFLRVHQFNKVEMVKFVLPETSYDELEALLGDAEDVLKALEIP YRVLLLCSGDISANAAKCYDIEVWSPAEEKFLEASSCSNFEDYQARRAQIRFRRQPKAKPEFVHTLNGSGLATSRLMVSL MENYQTPDGKIQVPKVLQKYMGCEVIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-87 | 51 |
