Gene Information

Name : Ctha_0318 (Ctha_0318)
Accession : YP_001995236.1
Strain : Chloroherpeton thalassium ATCC 35110
Genome accession: NC_011026
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 365359 - 366111 bp
Length : 753 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rba:RB1248 ABC-type multidrug transport system, ATPase component

DNA sequence :
ATGAGCGAAAAAAACTCAAAAGTGATGATTGAGGCAAAAGGATTGAGCAAATTTTATGAATCCTTTGTGGCTATTGAAAA
TGTGTCATTTTCTGTGCCGGAAGGCCAAGTAGTAGCGTTTCTTGGGCCGAACGGTGCGGGAAAATCCACGACCATGCGCA
TCTTGTCGGGCTACCTTGCGCCGAGCGAAGGCAGCGCAAAAATCGCCGGCTTTGATGTCGCGGAGGCGCGTTTGAAGGCC
GCCGCGCATCTTGGTTATCTTCCCGAAAACGGGCCTCTTTATTTGGACATGACGCCCTACGAATCGCTTCAATTTTTCGG
GGAAGCTCGCGGTCTTGAGCCTGCAAAGTTGAAAACGCGCATTGAAACCGTTACCGAGCTTGCCGCCTTGCAAGAAGTTT
TGGATAAACCTATCGGTCGGCTTTCGAAAGGCTATCGCCAGCGCGTCGGGCTTGCGCAAGCCTTGCTTCACGACCCGGAC
GTGCTGATTATGGACGAACCGACCTCCGGCCTTGACCCGAACCAAATTCGAGATTTTCGCGCCAACATCAAGGTGCTGGG
CAAAACAAAAACGATTTTGCTTTCCACGCACATTTTGCAGGAAGTGGAGGCCGTTGCGGAACGCGTGATTTTCATCAACG
AAGGGCGGCTTGTCTTCGACGGCTCGCCCGCCGAACTTCATGCCGAAAGCTCGCTCGAAGAGGCGTTCTATCGTTTAACC
TCACCGACCGAAACCCAAACAACCGAATCTTAA

Protein sequence :
MSEKNSKVMIEAKGLSKFYESFVAIENVSFSVPEGQVVAFLGPNGAGKSTTMRILSGYLAPSEGSAKIAGFDVAEARLKA
AAHLGYLPENGPLYLDMTPYESLQFFGEARGLEPAKLKTRIETVTELAALQEVLDKPIGRLSKGYRQRVGLAQALLHDPD
VLIMDEPTSGLDPNQIRDFRANIKVLGKTKTILLSTHILQEVEAVAERVIFINEGRLVFDGSPAELHAESSLEEAFYRLT
SPTETQTTES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 7e-28 42
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 7e-26 42
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 7e-26 42