Gene Information

Name : Ctha_2401 (Ctha_2401)
Accession : YP_001997298.1
Strain : Chloroherpeton thalassium ATCC 35110
Genome accession: NC_011026
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2880979 - 2882844 bp
Length : 1866 bp
Strand : -
Note : PFAM: thiamine biosynthesis protein ThiC; KEGG: fjo:Fjoh_1603 thiamine biosynthesis protein ThiC

DNA sequence :
ATGAGTAGCCAAACCGTCAAGCCGGAAATTAGCACTACGCCTTTTCCGGCATCAAAGAAAATATATGTCAAGGGAAAAAT
CCATCCGGTTTCCGTCGCAATGCGCGAGATTTCTCTGTCCGGTGAATACAAAGTGGAGGGAAAGAGCGTCTCCAGCGTGA
CGGTCTATGACACCAGCGGCGCCTACACCGACCCGAACATAGAAATTGATATTAAAAAAGGCCTTGAACCGATTCGCAAG
CAATGGATTTTAGAGCGCAACGATACGGAGGAACTTTCCGAAGTGAGTTCAAAATTTGCGCAATCGCAGCAGGCAAACGG
CACGATTGAGCCTGAATTGCGCTTCCCGAACGAGCCGAAACCGCGCAAAGCGACAACGGGAAAAATCGTCACGCAGATGC
ACTACGCGAAAAAAGGCATCGTTACGCCCGAAATGGAATACGTTGCCATTCGCGAAAATCAGCGTTACGAGGAATGGAAA
GATTTATGCAAGCAACACGCCGGCATGAATTGGGGCGCCGCATTGAGAAAGGGCGCGATTACGCCGGAATTTGTGCGCGA
CGAAATCGCAAAAGGCCGCGCGATTATTCCTGCCAATATCAACCATCCCGAAGCCGAACCGATGATTATCGGCAGAAATT
TTTTGGTAAAAATCAACGCGAATATCGGCAACTCGGCGGTGCGTTCGGGCATTGCGGAGGAAGTGGAGAAAGCAGTTTGG
GCGTGTCGTTGGGGCGCGGACACGATTATGGATTTAAGCACCGGCGAGCATATTCATCAGACGCGCGAATGGATTGTGCG
CAACTCGCCTGTTCCTGTTGGCACCGTGCCGATTTATCAGGCGCTGGAAAAAGTGGATGGCGTTGCCGAGGATTTGACTT
GGGAAATTTATCGAGACACGCTTATCGAGCAGGCCGAGCAAGGCGTGGATTATTTCACGATTCACGCGGGCGTGCTGTTG
CGCTACATTCAACTGACGGCGAAACGCACCACCGGCATTGTTTCGCGAGGCGGTTCAATTCTCGCTAAATGGTGCTTGTC
GCATCATCAGGAAAATTTCCTTTACACGCATTTCGACGAAATCTGTGAAATTCTAAAAGCTTACGATGTCGGCGTCTCGC
TCGGTGACGGCCTGCGTCCCGGCTCGCTTGCCGACGCGAACGACCATGCGCAGTTCAGCGAACTTCGCACGCTCGGCGAA
CTCACGAATGTTGCGTGGCAGCACGACGTTCAAGTCATGATTGAAGGGCCTGGTCATATTCCGATTCACCTTATTAAGGA
AAATGTCGAAAAAGAGCTTGAAGAATGCTACGAAGCGCCGTTCTACACTTTAGGCCCGCTCACGACGGACATCGCGCCCG
GCTACGACCACATCACTTCGGCCATTGGCGCGGCAAATATCGGCTGGTACGGCTGCGCGATGCTGTGCTATGTGACGCCG
AAAGAGCATCTCGGCTTGCCGAACAAGGAAGATGTTCGCGAAGGCGTGATTGCTTACAAAATTGCGGCGCACGCGGCAGA
TTTGGGAAAAGGCCATCCCGGAGCGCAATTCCGCGATAATATTCTCAGTCAAGCTCGTTTCAAATTCAATTGGCAAGACC
AATTCAACCTTTCGCTTGACCCGGAAAAAGCGAAGGATTTCCATGAGAAAACATTGGTGAAACGACCGGACGAGGTCACG
CATTTTTGCTCCATGTGTGGCCCGAAGTTCTGCTCGATGAAAATCACGCAGGAAGTTCGCGATTTTGCAAACAAACAGGC
CATCGACGAAAAGAGCGCGTTGGAATACGGTTTGCAGAAAAAAGCGAAAGAGTTTAAAGAGGCGGGCGGAAAAATTTATG
TCACGCCGGAAGAAGTGAAAAAATGA

Protein sequence :
MSSQTVKPEISTTPFPASKKIYVKGKIHPVSVAMREISLSGEYKVEGKSVSSVTVYDTSGAYTDPNIEIDIKKGLEPIRK
QWILERNDTEELSEVSSKFAQSQQANGTIEPELRFPNEPKPRKATTGKIVTQMHYAKKGIVTPEMEYVAIRENQRYEEWK
DLCKQHAGMNWGAALRKGAITPEFVRDEIAKGRAIIPANINHPEAEPMIIGRNFLVKINANIGNSAVRSGIAEEVEKAVW
ACRWGADTIMDLSTGEHIHQTREWIVRNSPVPVGTVPIYQALEKVDGVAEDLTWEIYRDTLIEQAEQGVDYFTIHAGVLL
RYIQLTAKRTTGIVSRGGSILAKWCLSHHQENFLYTHFDEICEILKAYDVGVSLGDGLRPGSLADANDHAQFSELRTLGE
LTNVAWQHDVQVMIEGPGHIPIHLIKENVEKELEECYEAPFYTLGPLTTDIAPGYDHITSAIGAANIGWYGCAMLCYVTP
KEHLGLPNKEDVREGVIAYKIAAHAADLGKGHPGAQFRDNILSQARFKFNWQDQFNLSLDPEKAKDFHEKTLVKRPDEVT
HFCSMCGPKFCSMKITQEVRDFANKQAIDEKSALEYGLQKKAKEFKEAGGKIYVTPEEVKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 71
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 71
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 68