Gene Information

Name : Ctha_1803 (Ctha_1803)
Accession : YP_001996707.1
Strain : Chloroherpeton thalassium ATCC 35110
Genome accession: NC_011026
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2138675 - 2139373 bp
Length : 699 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_0473 ABC transporter related

DNA sequence : 
ATGATTTTTCTGAAATCGGTTCGCAAAGAACTCAATTTATCCAAAGATATTAAACAGACCATTATTCCAAATCTCACGCT
GGAAATCAAGCGCGGCGAGTTTGTGGCAATTACAGGCCCTTCCGGTTCGGGAAAATCGACTTTGCTTTACATCATGGGCG
GATTGGACAAGCCCACTTCGGGCGAAGTTTGGCTCGATGGCGAAAACATCGCGGAGAAAAATGAGGACGAAATGGCGCAG
ATTCGCAATGAAAAAATCGGGTTTATCTATCAATTTCACTTTCTTTTACCAGAATTTTCCGCGCTGGACAATGTGATGAT
GCCGATGCTCATCAACGAGCGCTACACGCGAAAGTCGGCCAAAGAACGCGCCGAAATGCTGCTCGCAACGGTTGGGCTTG
AAAATAAAATGACAAACAAACCCGCGCAGCTTTCTGGCGGACAGCAGCAGCGTGTAGCCATCGCGCGCTCGCTTGCAACT
GAGCCAATCGTGCTTTTTGGCGACGAACCCACAGGAAACTTGGACACAAAATCAGCCAGCAACGTCTATGAGCTTTTCAA
AAAACTCAATCGCGAATTGCAACAAACCATTGTGATCGTCACGCACGATGATGATTTTGCTCAAGCTGCTGAACGCCGCA
TTCACTTGGTGGATGGCGCCATTGCAAGCGACACCGTTTTAGCCAAAAATCCGGCTTAG

Protein sequence : 
MIFLKSVRKELNLSKDIKQTIIPNLTLEIKRGEFVAITGPSGSGKSTLLYIMGGLDKPTSGEVWLDGENIAEKNEDEMAQ
IRNEKIGFIYQFHFLLPEFSALDNVMMPMLINERYTRKSAKERAEMLLATVGLENKMTNKPAQLSGGQQQRVAIARSLAT
EPIVLFGDEPTGNLDTKSASNVYELFKKLNRELQQTIVIVTHDDDFAQAAERRIHLVDGAIASDTVLAKNPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-33 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ctha_1803 YP_001996707.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-36 47
Ctha_1803 YP_001996707.1 ABC transporter-like protein NC_012469.1.7686878. Protein 7e-39 46
Ctha_1803 YP_001996707.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-36 44
Ctha_1803 YP_001996707.1 ABC transporter-like protein NC_008702.1.4606598. Protein 8e-32 43