Gene Information

Name : Ctha_1475 (Ctha_1475)
Accession : YP_001996381.1
Strain : Chloroherpeton thalassium ATCC 35110
Genome accession: NC_011026
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1729938 - 1730825 bp
Length : 888 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gfo:GFO_2288 ABC-type multidrug transporter ATP-binding protein

DNA sequence :
ATGCCGGTTATCGAGACCATTGGTTTAACAAAAGCGTTCAAAACAAGAAAAGCAGTTGATAACGTCCATTTAACCGTAGA
AAGCGGACAAATTTTTGGATTTTTAGGCCCCAATGGAAGCGGGAAAACCACCACCATTGGCATGTTGCTTGGCATTATTC
ATCCCACTTCTGGCGCTATCAAGCTTTTCAATTCGCCCGATATTCATCAAGCCAGGCGGCGAGTAGGCGCCATTTTAGAA
TCACCTAATTTTTATCCCTACCTGACAGGTTATGAAAATTTAAAAATCAGTGCAAAAATCAAGCGTTGCCCAACTTCCCA
AATAGATAAAGTCATTCAAGTTATGGGACTCAAAGGCCGCGAGCACGGCTTGGTGAGAACCTTTTCCTTAGGAATGAAAC
AGCGCCTGGCCATTGCGTCTGCCCTGCTCACCAATCCTGACTTGGTCATTTTGGATGAACCAACCAACGGGTTAGACCCG
GAAGGCATTAAGGAAATTCGCGAAGTCACCAAAACTTTAGCAAGCGGCGGGAAAACCATTTTCCTTTCGAGCCATTTGCT
TAGCGAAGTTGAGCAAGTTTGCACGCACGTGGCCATTTTAAAACAAGGCAAAGTGATGCGCCAAGGCAGCATTGTGGAGC
TTTTGAGCAAGCATTTTGTGGCGGCTGTGAAACATGAAAACACGGCGCTGCTTTTGCAAACGATCTCCGAATACGACAAA
ACCGTGCGCGCAACCGTGAAGGATAATTTTGTACATGCGGAACTTTTGGATGGCAACTTGTCCGCATTAAACGAGTTTTT
AGCGCAAAAAGGCCTTTTCGTTTCTCACCTTTCAGATAGAAGGGTCAATCTGGAAGAATCGTTTTTTGAATTAACGGGTT
CGGAATAA

Protein sequence :
MPVIETIGLTKAFKTRKAVDNVHLTVESGQIFGFLGPNGSGKTTTIGMLLGIIHPTSGAIKLFNSPDIHQARRRVGAILE
SPNFYPYLTGYENLKISAKIKRCPTSQIDKVIQVMGLKGREHGLVRTFSLGMKQRLAIASALLTNPDLVILDEPTNGLDP
EGIKEIREVTKTLASGGKTIFLSSHLLSEVEQVCTHVAILKQGKVMRQGSIVELLSKHFVAAVKHENTALLLQTISEYDK
TVRATVKDNFVHAELLDGNLSALNEFLAQKGLFVSHLSDRRVNLEESFFELTGSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 1e-40 44
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 3e-35 43