Gene Information

Name : Rpal_0793 (Rpal_0793)
Accession : YP_001989826.1
Strain : Rhodopseudomonas palustris TIE-1
Genome accession: NC_011004
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 831160 - 831939 bp
Length : 780 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: nwi:Nwi_3049 ABC transporter ATPase subunit

DNA sequence : 
ATGACCGCCGCCTTCCTCACTGCGCGCGATCTCGCCGTCACGCTGTCCGGCCGCGAGGTGCTACGTGGTGTGTCGCTGTC
ACTGACCCGCGGGCATCTGGTGGCGCTGGTCGGCCCCAACGGCGCCGGCAAGACCACGCTGCTGCGTGCCCTCGCCGGCC
TGGTCGAGGCGCAGGGCGAGATCAAGATCGGCGGCGATTCCTTGGCGGCATTGCCGCTGCGCGAACGCGCCAAGCGGTTC
GGCTATTTGCCGCAGGGCCATCTGGTGCATTGGCCGCTGCCGGTGCGGGACGTCGTCGCACTCGGCCGGTTTCCGCACGG
CGCCACCGATCCGGCCTGGCTGTCGCCGCACGATGCCGAGGCGGTGACGCGCGCAATGGCGGTGACCGACGTCGCCCAGT
TCGCCGACCGCATCGTCACCGAACTGTCCGGCGGCGAACGCAGCCGCGTCGCGCTCGCCCGCGTGTTGGCAGTCGAGGCG
CCGGTGGTGCTCGCCGACGAGCCGACCGCCTCGCTCGATCCGCGCTATCAGCTCGACGTGATGCAGACCTTGCGTACCAC
CGCCGACGCCGGCACGTTGGTGATCGTTGTCACCCACGACCTCGGCCTCGCCGCGCGCTTTGCCGATACCGTTCTGGTGA
TGGCGAATGGCGGGCTCGCTGCCCATGGCACGCCCGCCGAAGCGCTGTCGGACGAGATCATGCAGCAGGTCTTTCGCGTC
AGCGCCTATCGGGCACAATATCAGGACAGCGGCGTGATCCTGCCGTGGTCCGGAACCTGA

Protein sequence : 
MTAAFLTARDLAVTLSGREVLRGVSLSLTRGHLVALVGPNGAGKTTLLRALAGLVEAQGEIKIGGDSLAALPLRERAKRF
GYLPQGHLVHWPLPVRDVVALGRFPHGATDPAWLSPHDAEAVTRAMAVTDVAQFADRIVTELSGGERSRVALARVLAVEA
PVVLADEPTASLDPRYQLDVMQTLRTTADAGTLVIVVTHDLGLAARFADTVLVMANGGLAAHGTPAEALSDEIMQQVFRV
SAYRAQYQDSGVILPWSGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpal_0793 YP_001989826.1 ABC transporter BAC0164 Protein 6e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpal_0793 YP_001989826.1 ABC transporter VFG1042 Protein 6e-25 41