Gene Information

Name : Rpal_5304 (Rpal_5304)
Accession : YP_001994265.1
Strain : Rhodopseudomonas palustris TIE-1
Genome accession: NC_011004
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5725790 - 5726455 bp
Length : 666 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: nha:Nham_1885 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGGGTGCTGGTGGTCGAGGACGACAGCCGAATCGCGTCGGAGCTGGCGCGCGGCCTCGGCGAAGCCGGTTACCTCGC
CGAGATCGTCGGTGACGGCGAAGAGGCGTGGTTTCGCGGTGATACCGAAGATTACGCCGCCATCATCCTCGACCTCGGTC
TGCCCGGGCTCGACGGCCTCACCATCCTGAAGCGCTGGCGCGACAACGGCCGCCTCACCCCGGTGCTGATACTCACCGCA
CGCGGAAGCTGGGCCGAACGGGTCGACGGCATCGATGCCGGCGCCGACGACTACCTGCCGAAGCCGTTCCAGATGGAGGA
GCTGCTGGCGCGGCTGCGCTCGATCGTGCGGCGCTCGGCCGGCCATGCCTCGTCGGTGGTCACCATCGGCGAGGTCATGC
TCGACGAGCGGCAGATGCAGGTCAGCGTCGGCGGCAAGCCGGTCTCGCTGTCGCCGCTGGAATATCGGCTGGCGTCCTAT
CTGGTGCTGCATCGCGGCCGGGTGGTGTCGCAATACGAACTTGCCGAGAACATCTACGGCCAGGACGACGCCCACGATTC
CAACGCCATCGAGGTGCTGGTCGGCCGGGTTCGCCGCAAGATCGGCGCCGACCTGATCGAGACCCGGCGCGGCTTCGGCT
ACATCGTGCCGGACGAGCGTTCATGA

Protein sequence : 
MRVLVVEDDSRIASELARGLGEAGYLAEIVGDGEEAWFRGDTEDYAAIILDLGLPGLDGLTILKRWRDNGRLTPVLILTA
RGSWAERVDGIDAGADDYLPKPFQMEELLARLRSIVRRSAGHASSVVTIGEVMLDERQMQVSVGGKPVSLSPLEYRLASY
LVLHRGRVVSQYELAENIYGQDDAHDSNAIEVLVGRVRRKIGADLIETRRGFGYIVPDERS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-21 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpal_5304 YP_001994265.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 4e-35 45
Rpal_5304 YP_001994265.1 winged helix family two component transcriptional regulator BAC0487 Protein 3e-28 44