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Name : Rpal_5124 (Rpal_5124) Accession : YP_001994088.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 5508675 - 5510690 bp Length : 2016 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : TTGAACGTTCCCGCACGCGACATCCACGACAAGGTCACGCATCGCGACATGGCGAATGCGATCCGCTTTCTCGCTATCGA CGGTGTCGAGAAGGCGAAGTCCGGCCACCCGGGCATGCCGATGGGCATGGCCGACGTTGCCACCGTGCTGTTCACCCGCT TCCTGAAGTTCGATCCGGCCGATCCGGCCTGGGCCGACCGCGACCGGTTCGTGCTGTCGGCCGGCCACGGCTCGATGCTG CTGTACGCGCTGCTGCATCTGACCGGCTATCCGGAAGTGACGATCGATCAGCTGAAGTCGTTCCGGCAGTGGGGTTCGAA GACCCCGGGCCATCCGGAATACGGCCACACCCAGGGCGTCGAGACCACCACCGGCCCGCTCGGCCAGGGGCTTGCGACCT CGGTCGGCATGGCGCTCGCCGAACGCATGATGAATGCTCGCTACGGCGACGCACTGGTCGATCACCACACCTACGTCATC GCCGGCGACGGCTGTCTGATGGAAGGCGTCAGCCACGAGGCGATCTCGCTGGCCGGGCACCTCAAGCTCAACAAGCTGAT CGTGCTGTGGGACGACAACCACATCTCGATCGACGGCGACACCTCGCTGTCGTGCTCGGACGATCAGCTCGCGCGCTTCG CCGCGTCGGGCTGGGCCACCACCCGCGTCGACGGTCATGATCCGGAAGCGGTCGCGGCCGCGATCGAGCAGGCCAAGAAC AGCGACCGTCCGTCGCTGATCGCCTGCCGCACCACGATCGGCTTCGGCTCGCCGAAGGTGGCGGGCACCGAGAAGGCGCA CGGCGCCCCGCTCGGCGCCGACGAGGTCGAGAAGACCCGCGCCGCGCTGAACTGGCCGTATCCGCCGTTCGAAATCCCCG ATCCGATCCTGGCGCGCTGGCGCGAGGCCGGCGGCCGCGGCAAGGCGGCGCACCAGGCCTGGACCCAGCGGCTGGCGGCG GCCGATGCTGCGACCCGCACCGGCTTCACCGATGCGCTCGCCGGCAAGCTGTCGGCGGACTACGAAGGCGCGCTGCAGGG CCTGATCGCCAAGTTCGACGCCGACAAGCCGACCATCGCCACCCGTCAGGCGTCGCAGCTCACCATCGACGCCATCGTGC CGGCGTCGCCGAACATCCTCGGCGGCTCGGCCGACCTGACGCACTCCAACCTGACGCATGCCAAGGGCACCGCGTCGGTG AAGCCGGGCGCGTTCGGCGGGTCCTACCTGCACTACGGCATCCGCGAATTCGGCATGGCGGCGGCGATGAACGGCATCGC GCTGCACGGCGGCTTCGTGCCGTTCGGCGGCACCTTCCTGGTGTTCGCCGACTACAGCCGTCCGGCGATCCGCCTCGCGG CGCTGATGGGCGTGCGCGTCATCCATGTGATGACCCACGACTCGATCGGCCTCGGCGAAGACGGCCCGACCCATCAGCCG GTCGAGCACGTCGCCTCGCTGCGCGCGATCCCGAACGTCCTGGTGTTCCGCCCGGCCGACGCGATTGAAACCGCGCAGGC CTGGGACTGTGCGCTGAAGCAGACCTCGCGTCCGTCGGTGCTGGCGCTGTCGCGTCAGGGCCTGCCGGCGCTGCCGCGTC CGAACGGCGCGACCGGCAACCCGGTGGCGCGCGGCGCTTATGTCGTGGTCGATCCCGGCCAGCGCGACGTCACCCTGATC GCCACCGGCTCGGAAGTGTCGCTGGCGCTGGATGCGGCGTCCAAGCTGGAAGCCGAAGGCATCAAGGCGGCGGTGGTGTC GGCCCCGTGCTTCGAACTGTTCGCCGACCAGGACGACGCGTACCGCGCCAGCGTGCTCGGCACCGCGCCGCGGATCGGCA TCGAGGCGGCCCGCGACACCGACTGGCGCCGCTGGATCGGTGATACCGGCGCGTTCGTCGGCATGACCGGGTTCGGTGCC TCGGCGCCGGCGCCGATCCTGTACCAGAAGTTCGGCATCACCGCGGACGCGGTGGTGGACGCCGCCAAGGGCGCGATCGC CCGCGGTAAGCACTGA Protein sequence : MNVPARDIHDKVTHRDMANAIRFLAIDGVEKAKSGHPGMPMGMADVATVLFTRFLKFDPADPAWADRDRFVLSAGHGSML LYALLHLTGYPEVTIDQLKSFRQWGSKTPGHPEYGHTQGVETTTGPLGQGLATSVGMALAERMMNARYGDALVDHHTYVI AGDGCLMEGVSHEAISLAGHLKLNKLIVLWDDNHISIDGDTSLSCSDDQLARFAASGWATTRVDGHDPEAVAAAIEQAKN SDRPSLIACRTTIGFGSPKVAGTEKAHGAPLGADEVEKTRAALNWPYPPFEIPDPILARWREAGGRGKAAHQAWTQRLAA ADAATRTGFTDALAGKLSADYEGALQGLIAKFDADKPTIATRQASQLTIDAIVPASPNILGGSADLTHSNLTHAKGTASV KPGAFGGSYLHYGIREFGMAAAMNGIALHGGFVPFGGTFLVFADYSRPAIRLAALMGVRVIHVMTHDSIGLGEDGPTHQP VEHVASLRAIPNVLVFRPADAIETAQAWDCALKQTSRPSVLALSRQGLPALPRPNGATGNPVARGAYVVVDPGQRDVTLI ATGSEVSLALDAASKLEAEGIKAAVVSAPCFELFADQDDAYRASVLGTAPRIGIEAARDTDWRRWIGDTGAFVGMTGFGA SAPAPILYQKFGITADAVVDAAKGAIARGKH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 4e-154 | 53 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 6e-147 | 50 |
