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Name : Rpal_4921 (Rpal_4921) Accession : YP_001993885.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 5300426 - 5303065 bp Length : 2640 bp Strand : - Note : KEGG: bbt:BBta_1195 chaperone; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; Clp domain protein; ATPase AAA; ATPase AAA-2 domain protein; SMART: ATPase AAA DNA sequence : ATGAACGTTGAAAAATATACCGAACGTGTGCGCGGCTTCATCCAGTCGGCGCAATCGCTGGCGATGCGCGAGGGCCATCA ACAGTTCTCGCCGCTGCACATTCTGAAAGTTCTGCTCGACGATTCCGAAGGGCTCGCGGGCGGTCTGATCGACCGTGCCG GCGGCAATTCGCGTGCGATTCTGAAGGCGACCGAAGAGGCGCTCGGCAAGATGCCGAAGGTGTCCGGCTCGGGCGCAGGC CAAGTCTACCTGGCTCCGGCGACCGCCCGGGCGTTCGACGCTGCCGAGAAGGCGGCCGAAAAGGCCGGCGACAGCTTCGT CACCGTCGAGCGGCTCCTGCTCGCGCTGTCGCTCGATAAGGACAGCGAGGCCGGCCAGCTGCTCACCAAGGGCGGCGTCA CCCCGCAGAACCTCAATGCCGCCATCAACGCCCTGCGCAAGGGCCGCACGGCGGATTCCGCCACGGCCGAGAACGCCTAT GACGCGCTGAAGAAATATGCCCGCGACCTCACCCAGGCGGCGCGCGACGGTAAGCTCGACCCGGTGATCGGTCGCGACGA GGAGATCCGCCGCACGATTCAAGTCCTGTCCCGCCGCACCAAGAACAACCCGGTACTGATCGGCGAACCCGGCGTCGGTA AGACCGCGATCGTCGAAGGCCTGGCGCTGCGCATCCTCAATGGCGACGTGCCGGAGAGCCTGAAGGACAAGAAGCTGCTG GCGCTCGACATGGGCGCGCTGATTGCCGGCGCGAAATATCGCGGCGAGTTCGAAGAGCGGCTGAAGGCCGTGCTCAACGA GGTCACCGCGGCCGAGGGCGGCATCATCCTGTTCATCGACGAGATGCACACCCTGGTCGGCGCCGGCAAGGCGGACGGCG CGATGGACGCGTCGAATCTGCTCAAGCCCGCGCTTGCCCGTGGCGAGCTGCATTGCATCGGCGCGACCACGCTGGATGAA TATCGCAAGCACGTCGAGAAGGACGCCGCACTGGCGCGGCGCTTCCAGCCGGTGTTCGTGTCCGAGCCGACGGTCGAGGA CACCGTCTCGATCCTGCGCGGCCTGAAAGACAAGTACGAGCAGCACCACGGCGTGCGCATTGCCGACTCGGCGCTGGTGG CCGCCGTCACGCTGTCGAACCGCTACATCACCGACCGCTTCCTCCCCGACAAGGCGATCGACCTGATGGACGAGGCCGCG GCGCGGCTGAAGATGCAGGTCGACTCCAAGCCCGAAGAACTCGACTCGATGGACCGCGAGATCGTGCGGCTGAAGATCGA GCAGGAGGCGTTGAAGAAGGAAACCGATCCGGGCTCGAAGGCGCGCCTGGTGACGCTGGAGAAGGAGCTTGCCGATCTCG AAGAGAAGTCGGCGGCGTTGACCCAGCGTTGGAGTGCCGAGAAGAACAAGCTGTCGGATGCCCAGAAGCTGAAGAGCGAA CTCGACGCTCTGCGGATTGAACTCGCCAACGCGCAGCGCCGCGGTGAGTATCAGCGCGCGGGCGAGCTCGCCTATGGCCG GATTCCGGAGCTTGAGAAGAAGATCGCTGAGATCGAAGCCAACGAGAACTCGGGCGCGATGGTGGAGGAGGCGGTCACCG CCAATCACATCGCCCAGGTGGTGTCGCGCTGGACCGGCGTGCCGGTCGACAAGATGCTCGAAGGCGAGAAGGAAAAGCTG CTGCGGATGGAAGAGCAGCTCGGCCAGCGCGTGGTCGGGCAGTTCGAAGCCGTGCATGCGGTCTCGACCGCGGTCCGCCG TGCTCGCGCCGGCCTGCAGGACCCGAACCGTCCGATGGGCTCGTTCATGTTCTTAGGCCCCACCGGCGTCGGCAAGACCG AGCTGACCAAGGCGCTCGCCGAGTATCTGTTCGACGACGAGACCGCGATGGTCCGCATCGACATGTCGGAGTTCATGGAG AAGCACTCCGTGGCCCGGCTGATCGGCGCACCTCCCGGCTATGTCGGCTACGACGAAGGCGGTGTGCTGACCGAAGCGGT GCGGCGCCGGCCCTACCAGGTGATCCTGTTCGACGAGATCGAGAAGGCGCATCCGGACGTGTTCAACGTGCTGCTGCAGG TGCTCGATGACGGCCGCCTGACCGATGGTCAGGGCCGCACCGTGGACTTCCGCAACACGCTGATCGTGATGACCTCGAAC CTCGGCTCGGAGTATCTGGTCAACCAGCCTGAGGGCGAGGACACCGGCGCGGTGCGCGAGCAGGTGATGGGGATGGTGCG GGCGCACTTCCGCCCCGAATTCCTCAACCGCGTCGACGAGATCATCCTGTTCCACCGCTTGCAGAAGAGCGAGATGGGGC GGATCGTCGACATCCAGTTCGCGCGGCTCACCAAGCTGCTCGAGGACCGCAAGATCGTGCTCGATCTCGATGCTGCGGCC CGCGACTGGCTCGCCGAGAAGGGCTGGGATCCGGCTTACGGCGCCCGTCCGCTGAAGCGGGTGATCCAGCGCAGCGTCCA GGACCCGCTCGCCGAGATGATCCTGGAAGGCTCCGTCAAGGATGGCGACCACGTCGCGATCTCGGCGGAAGGCGGCGTGC TGACCTTCAACGGCAAGCCGCCGCACACCGCCGAGGTCGAGCCGTTCACGGGTCGTCCGCCGAAGCGGATGCTGAACTGA Protein sequence : MNVEKYTERVRGFIQSAQSLAMREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGNSRAILKATEEALGKMPKVSGSGAG QVYLAPATARAFDAAEKAAEKAGDSFVTVERLLLALSLDKDSEAGQLLTKGGVTPQNLNAAINALRKGRTADSATAENAY DALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKDKKLL ALDMGALIAGAKYRGEFEERLKAVLNEVTAAEGGIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCIGATTLDE YRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKDKYEQHHGVRIADSALVAAVTLSNRYITDRFLPDKAIDLMDEAA ARLKMQVDSKPEELDSMDREIVRLKIEQEALKKETDPGSKARLVTLEKELADLEEKSAALTQRWSAEKNKLSDAQKLKSE LDALRIELANAQRRGEYQRAGELAYGRIPELEKKIAEIEANENSGAMVEEAVTANHIAQVVSRWTGVPVDKMLEGEKEKL LRMEEQLGQRVVGQFEAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFME KHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSN LGSEYLVNQPEGEDTGAVREQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGRIVDIQFARLTKLLEDRKIVLDLDAAA RDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILEGSVKDGDHVAISAEGGVLTFNGKPPHTAEVEPFTGRPPKRMLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-112 | 44 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 6e-110 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-110 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpal_4921 | YP_001993885.1 | ATP-dependent chaperone ClpB | VFG0079 | Protein | 3e-177 | 48 |
| Rpal_4921 | YP_001993885.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 4e-124 | 45 |
| Rpal_4921 | YP_001993885.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 7e-117 | 43 |
