Gene Information

Name : fixJ (Rpal_4727)
Accession : YP_001993693.1
Strain : Rhodopseudomonas palustris TIE-1
Genome accession: NC_011004
Putative virulence/resistance : Virulence
Product : response regulator FixJ
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 5089091 - 5089702 bp
Length : 612 bp
Strand : +
Note : response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes

DNA sequence : 
ATGCCTAAGGGAACCGTGCATGTGATCGACGACGACCTGGCGATGCGGGAGTCGATCGAATTCCTGCTGAGCTCGGCCGG
CTACGAGGTCAAGCTGTACGAATCCGCGCAGACATTTCTCGATCTGCCAGACGTAGAGTTCGGTTGCATCCTGTCCGACG
TCCGCATGCCGGGGATCGACGGCCTCGACCTGCTGAAGCGGCAGAAGGCGGCCGGCAGCAAGCTGCCGGTGCTGATCATG
ACCGGCCACGGCGACGTTCCGCTCGCGGTCGAAGCGATGAAGCTCGGCGCCTCGGACTTCATCGAGAAGCCATTCGACGA
CGACCGGCTGATCGGACTGATCGAACTGGCGCTGAAGCAGGCGCAGGAAGGCGCCAAGAGCGAGGCAGTGACGCAGGATA
TCGCGACGCGTATCCAATCGCTCAGCCCGCGCGAACGCCAGGTAATGGACGGCCTGATCGCCGGCATGTCCAACAAGGTG
ATTGCCCGCGAATTCGATATCAGCCCGCGTACCATCGAGGTCTATCGCGCCAACGTGATGACCAAGATGCAGGCCACGAG
CCTGTCGGAACTCGTGCGGATGGCGATGCGCGGCGGCGTCATCAAGGATTGA

Protein sequence : 
MPKGTVHVIDDDLAMRESIEFLLSSAGYEVKLYESAQTFLDLPDVEFGCILSDVRMPGIDGLDLLKRQKAAGSKLPVLIM
TGHGDVPLAVEAMKLGASDFIEKPFDDDRLIGLIELALKQAQEGAKSEAVTQDIATRIQSLSPRERQVMDGLIAGMSNKV
IAREFDISPRTIEVYRANVMTKMQATSLSELVRMAMRGGVIKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 4e-27 41
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 3e-27 41
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 4e-27 41
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 4e-27 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 3e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fixJ YP_001993693.1 response regulator FixJ VFG0488 Protein 1e-27 41