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Name : Rpal_4597 (Rpal_4597) Accession : YP_001993565.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 4957403 - 4958326 bp Length : 924 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: bja:blr2054 transposase DNA sequence : GTGGTGACGCCCGCGGCCAAGCGGAAAGCTGTCGCGCATCTGCAAACTGCATTCGAGATGAGCGAACGGCGGGCGTGTAA AGCCATCGGCTGCTGCCGCATGACAGTCAGATATCAGACGAGCCGGAGCGATGATGCCGGGCTGCGCCAACGTATGAGGG CGATCGCCCATGAGCGCCGGCGCTTTGGCTATCGGCGCCTCCACGTCCTGCTCAAGCGTGAGGGCTACCTGGTCAATCAC AAGAAGCTGTTCCGGCTGTACCGTGAGGAGAAGCTCACAGTGCGCCGCCGGGGTGGCCGCAAACGGGCCCTCGGCACACG AGCTCCCATAACAGTGCCGGTGCTCCCGAATGATCGCTGGTCGCTCGACTTCGTGTCGGATCAGATGACCGATGGTCGAC GCTTCCGCATTCTGACTGTGGTCGACGACTGCACCCGCGAGTGCCTGGCGCTGGTGGTCGACACCTCGCTCTCGGGCGCC CGGGTCGCACGAGAACTGGACCGGCTGGTTGCCGAGCGCGGCAAGCCCAAGATGGTGGTGAGCGACAATGGCAGCGAGTT CACCAGCAATGCCATCCTGACATGGGCCGATCAGAGCCGTATCGCCTGGCACTACATTGCGCCGGGAAAACCCATGCAAA ACGCCTTCATCGAGAGCTTCAACGGCCGCCTGCGGGATGAACTGCTGAACGAAACGCTGTTCACCTCGCTGGCCCAGGCC CGCGTAGCGCTCCGGTGCTGGCGGGCCGACTACAATGATGCACAACCGCACTCACAGCTCGGGTGGCGGACGCCATCCGA GTTCGCCGCCACCTGCAATCCACGTCGGGATCTGGCGCTGCGCTATATCGAAAGCTCCACGCCAGCTCCCGCCACCGCCC ACATGGGCCCATCTAACCACCCGAACGAACTCAGACCTGGATAA Protein sequence : MVTPAAKRKAVAHLQTAFEMSERRACKAIGCCRMTVRYQTSRSDDAGLRQRMRAIAHERRRFGYRRLHVLLKREGYLVNH KKLFRLYREEKLTVRRRGGRKRALGTRAPITVPVLPNDRWSLDFVSDQMTDGRRFRILTVVDDCTRECLALVVDTSLSGA RVARELDRLVAERGKPKMVVSDNGSEFTSNAILTWADQSRIAWHYIAPGKPMQNAFIESFNGRLRDELLNETLFTSLAQA RVALRCWRADYNDAQPHSQLGWRTPSEFAATCNPRRDLALRYIESSTPAPATAHMGPSNHPNELRPG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 1e-53 | 50 |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 2e-42 | 44 |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 3e-44 | 42 |
