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Name : Rpal_4503 (Rpal_4503) Accession : YP_001993474.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 4847692 - 4848684 bp Length : 993 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bja:bll5920 UDP-glu DNA sequence : ATGGCAGAGACAGCGGTCCTGGTCACGGGAGCGGCAGGCTTCATCGGGTATCACGTCGCCCGCGAGTTGCTGGAGGCTGG CAACGTGGTGGTCGGCCTGGACAGCCTCAACGACTATTACGACCCGGCGCTGAAGCAGGCCCGGCTCGATCTGCTGACGC CTTATCCCGGTTTCAGCTTTGTGCGTGCTGATCTGTCCGACAGGGCGGCGATCGCGGACTTGTTCGCAAAACACCGCTTT CCCGTGGTGATCCACCTCGCTGCCCAGGCCGGGGTGCGGCATTCGCTCAGCCATCCGCACGATTATGCCGACTCCAATCT GGAGGGCTTCCTCAACGTGTTGGAGGGCTGCCGGCACAATGGCTGCAGCCACCTGATCTACGCATCCTCATCTTCGGTCT ACGGCGCCAATACTAAGCTGCCGTTCTCGGTGGCTGATCCGACCGACCACCCGATCAGCCTGTATGCGGCGACCAAAAAA GCCAACGAGTTGATGGCGCATTGCTACAGCCATCTGTACCGGCTGCCGACCACTGGCCTGCGGTTTTTTACGATCTACGG ACCATGGTACCGGCCGGATATGGCGCTCTATCTGTTCGCCAGGGCCATCACCGAAGGGCGTCCAATCAAGCTGTTCAATC ACGGCAAGATGCGGCGCGACTTCACGTTCGTCGATGACGTCACCCGTGTCGTGACCAAGCTGATGACGCTGGTGCCGACC GCCGAGCCCGGCCAGAACGGCGGTGCGCCCGCTCGGGTCTACAATGTCGGCAACCACAGCCCGGAGGAGTTGATGCATGT GGTCGCGCTACTTGAGCGCGCGCTTGGGCGTCCGGCGATCAAGGAGATGCTGCCGATGCAGCCAGGCGACGTGCCGGAGA CGTTTGCGGACGTCGAAGCCCTGTTCCGGGACGTCGGCTTCCGGCCTTCGACCCCGATCGAGGACGGGGTCCGCGCTTTC GTAAGATGGTTTCGCGACTACCACAGGGTGTAA Protein sequence : MAETAVLVTGAAGFIGYHVARELLEAGNVVVGLDSLNDYYDPALKQARLDLLTPYPGFSFVRADLSDRAAIADLFAKHRF PVVIHLAAQAGVRHSLSHPHDYADSNLEGFLNVLEGCRHNGCSHLIYASSSSVYGANTKLPFSVADPTDHPISLYAATKK ANELMAHCYSHLYRLPTTGLRFFTIYGPWYRPDMALYLFARAITEGRPIKLFNHGKMRRDFTFVDDVTRVVTKLMTLVPT AEPGQNGGAPARVYNVGNHSPEELMHVVALLERALGRPAIKEMLPMQPGDVPETFADVEALFRDVGFRPSTPIEDGVRAF VRWFRDYHRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-78 | 51 |
