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Name : fliQ (Rpal_4408) Accession : YP_001993379.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliQ Function : - COG functional category : N : Cell motility COG ID : COG1987 EC number : - Position : 4734643 - 4734906 bp Length : 264 bp Strand : - Note : FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum DNA sequence : ATGACCGGCCCCGAAACTCTCGACGTCGCCCGCGACGCGATCTGGACCATCGTCGTGGTATCGGCGCCGCTGATGGTGGT CGGCCTGGTGGTCGGCGTCGCGGTGTCGCTGGTCCAGGCGCTAACCCAGATCCAGGAACAGACGCTGGTGTTCGTGCCGA AAATCCTGGCGATGTTCGTCACGCTGGTGCTGGCGCTGCCCTTCATGGCCGACGCGCTGCACTCGCAGATGATGCGGATC TCATCGCGAATCATCGGCGGTTGA Protein sequence : MTGPETLDVARDAIWTIVVVSAPLMVVGLVVGVAVSLVQALTQIQEQTLVFVPKILAMFVTLVLALPFMADALHSQMMRI SSRIIGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcS | AAT96263.1 | HrcS | Virulence | S-PAI | Protein | 7.0 | 50 |
| hrcS | AAT96304.1 | HrcS | Virulence | S-PAI | Protein | 7.0 | 50 |
| hrcS | AAT96344.1 | HrcS | Virulence | S-PAI | Protein | 7.0 | 50 |
| hrcS | ABA47280.1 | HrcS | Virulence | S-PAI | Protein | 1.5 | 46 |
| ssaS | NP_456108.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 0.070 | 41 |
| ssaS | CAA68200.1 | secretion system apparatus, SsaS | Virulence | SPI-2 | Protein | 0.040 | 41 |
| ssaS | NP_805091.1 | type III secretion protein | Virulence | SPI-2 | Protein | 0.070 | 41 |
| ssaS | YP_216428.1 | secretion system apparatus protein SsaS | Virulence | SPI-2 | Protein | 0.057 | 41 |
| ssaS | NP_460385.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 0.057 | 41 |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 7.5 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliQ | YP_001993379.1 | flagellar biosynthesis protein FliQ | VFG0395 | Protein | 2e-04 | 45 |
| fliQ | YP_001993379.1 | flagellar biosynthesis protein FliQ | VFG0520 | Protein | 0.016 | 41 |
