|
Name : Rpal_4210 (Rpal_4210) Accession : YP_001993181.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 4513189 - 4514826 bp Length : 1638 bp Strand : - Note : PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; KEGG: nwi:Nwi_0292 ABC transporter ATPase subunit DNA sequence : ATGGACGCGATCAACCAGCCTCTCCTGGACGTCTCCGACCTGTCGGTGGCGTTTCACCAGCCCAGCGGGACGACGACTGC CGTCGATCATGTGTCGTTCCGGATCAAGCGCGGCGAGTGCGTCGCACTGGTCGGCGAATCCGGCTCGGGCAAGTCGGTCA GCGCGCTGTCGATCCTGAAGCTGCTGCCGTATCCGAGCGCGTCGCATCCGTCCGGCCATATCCGGTTCAAGGGGCACGAA CTGCTCGGGATGTCCGAGCGCGAGATCCGCGGCATTCGTGGCAACGAGATCTCGATCGTGTTTCAGGAGCCGATGACCTC GCTCAATCCGCTGCACACGATCGAGGCCCAGATCGGCGAAATCCTGCAGTTGCACGGCGGCGTGCGCGGCGCCAAGGCAC GGGCGCGGATCATCGAGCTGCTGACCCAGGTTGGCATCCCCGAGCCGGAGACACGTCTCGCCAGCTATCCGCATCAATTG TCCGGCGGGCAGCGCCAGCGCGTGATGATCGCGATGGCGCTCGCGAACGAGCCGGATCTGCTGATTGCCGACGAGCCGAC CACGGCGCTCGACGTCACCGTGCAGGCGCAGATCTTGGCGCTGCTCGCCGACATCCGCGCGCGGCTCGGGATGAGCATGC TGTTCATCACCCACGATCTCGGCATCGTCCGTCGTATCGCCGATACGGTGTGCGTGATGCACACCGGCAAGATCGTCGAG CAGGGGCCGGTCGAACAAGTATTCACCGATCCGCAGCATCCCTACACCAAGGCGCTGCTTGCCGCCGAGCCGAAGCCCGA CCCGGCGCCGCCGTGTCCCGATGCGCCGGTGGTGATCTCGACGAACGATCTCAAGGTCTGGTTTCCGATCCGCCGTGGCC TGCTGCGCAAGACCGTCGGCCATATCAAGGCGGTCGACGGCGTGACGCTGGCGATCCGCAAAGGCGAGACGCTCGGCGTG GTGGGCGAGTCCGGTTCGGGCAAGACAACGCTGGGACTGGCGCTGCTGCGGTTGATCTCGTCCGACGGGCCGATCGTGTT TCTCGGCAAGGATGTTCAGGGTCTGAAGTTCAAGCAGATGCTGCCGTTTCGCCGCGATATGCAGATCGTGTTTCAAGACC CGTTCGGAGCGCTCAGCCCGCGCATGTCGGTCGGCGACATCATTGCCGAGGGGCTGAGCGTGCATCAGCCGCAACTCGGC GAGTCCGAGCGCGAGGCGCGGGTGATCAAGGCGCTGAAGGATGTCGGCCTCGATCCGGCGACGCGCTTCCGCTATCCGCA CGAGTTCTCCGGCGGCCAGCGCCAGCGGATTTCGATCGCGCGCGCGGTGGTGCTGGAGCCGAACTTCGTCGTGCTCGACG AGCCGACCAGCGCGCTCGACATGCTGTTTCAAGCCCAGATGGTCGATCTGCTTCGCGAACTGCAGCGCAAGCGCGACCTG ACCTACATGTTCATCTCCCACGATCTGCGGGTGGTCGCCTCGCTCGCCAGTCATTTGATCGTCATGAAACAAGGCAAAGT GGTCGAGGAAGGCCCCGCAGGCGAGCTATTCAAGTCTCCGAAGACCGATTATACGCGGGCGCTGTTTGCCGCTGCGTTCC GGCTCGAGACCGCGCCCGGCGGCGCTGCGGCTCAATAG Protein sequence : MDAINQPLLDVSDLSVAFHQPSGTTTAVDHVSFRIKRGECVALVGESGSGKSVSALSILKLLPYPSASHPSGHIRFKGHE LLGMSEREIRGIRGNEISIVFQEPMTSLNPLHTIEAQIGEILQLHGGVRGAKARARIIELLTQVGIPEPETRLASYPHQL SGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILALLADIRARLGMSMLFITHDLGIVRRIADTVCVMHTGKIVE QGPVEQVFTDPQHPYTKALLAAEPKPDPAPPCPDAPVVISTNDLKVWFPIRRGLLRKTVGHIKAVDGVTLAIRKGETLGV VGESGSGKTTLGLALLRLISSDGPIVFLGKDVQGLKFKQMLPFRRDMQIVFQDPFGALSPRMSVGDIIAEGLSVHQPQLG ESEREARVIKALKDVGLDPATRFRYPHEFSGGQRQRISIARAVVLEPNFVVLDEPTSALDMLFQAQMVDLLRELQRKRDL TYMFISHDLRVVASLASHLIVMKQGKVVEEGPAGELFKSPKTDYTRALFAAAFRLETAPGGAAAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-96 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-83 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-83 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 7e-83 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-83 | 42 |
