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Name : Rpal_4096 (Rpal_4096) Accession : YP_001993067.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 4394348 - 4396273 bp Length : 1926 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAATATCCGCTCCAATCCCGAGACCACCCGCGCGGCTGTGACCACCGGTGCCCTGCCCTCCTCCAAGAAGATCTACGC CACGCCTGCCAGCGCGCCGGATCTGCGCGTGCCGCTGCGCGAGATCATCCTGAGCGAAGGCGCAGGCGAGCCGAACCTGC CGGTGTACGACACCTCCGGCCCCTACACCGATCCGACCGTCGTGATCGACGTCAACAAGGGCCTGCCGCGTCCGCGCACC GAATGGGTCAAGCAGCGCGGCGGCGTCGAGCAATATGAGGGCCGCGACATCAAGCCGGAAGACAACGGCAATGTCGGCGC TGCGCACGCGGCCAAAGCCTTCACCGCGCATCACCAGCCGCTGCGCGGGATCAGTGATGCGCCGATCACCCAATACGAAT TCGCCCGCCGCGGCATCATCACCAAGGAGATGATCTACGTCGCCGAGCGCGAGAATTTGGGCCGCAAGCAGCAGCTCGAG CGTGCCGAGGCGGCGCTGGCCGATGGTGAATCGTTCGGCGCCGCGGTGCCGGCGTTCATCACGCCGGAATTCGTCCGCGA CGAGATCGCCCGCGGCCGCGCCATCATTCCGGCCAACATCAATCACGGCGAACTCGAGCCGATGATCATCGGCCGCAACT TCCTCACCAAGATCAACGCCAATATCGGCAACTCGGCGGTGACCTCGTCGGTCGAGGAGGAAGTCGACAAGATGGTGTGG GCGATCCGCTGGGGTGCCGACACCGTGATGGACCTCTCGACCGGCCGCAACATTCATACCACCCGCGAATGGATCTTGCG CAACTCGCCGGTGCCGATCGGCACCGTGCCGATCTATCAGGCGCTGGAGAAGTGCGAAGGCGATCCGGTCAAGCTGACCT GGGAGCTGTACAAGGACACGCTGATCGAGCAGGCCGAACAGGGCGTCGATTACTTCACCATCCACGCCGGCGTGCGGCTG CAGTACATCCACCTCACCGCCAGCCGGGTCACCGGCATCGTGTCGCGCGGCGGCTCGATCATGGCGAAGTGGTGCCTGGC GCATCACAAGGAGAGCTTCCTCTACACGCATTTCGACGAGATCTGCGACCTGATGCGGAAGTACGACGTGTCGTTCTCGC TCGGCGACGGCCTGCGGCCGGGCTCGATCGCGGACGCCAACGACCGCGCCCAGTTCGCCGAACTGGAGACGCTCGGCGAG CTCACCAAGATCGCCTGGGCCAAGGGCTGCCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGATGCACAAGATCAAGAT CAACATGGACAAGCAGCTCAAGGAGTGCGGCGAGGCGCCGTTCTACACCTTGGGCCCGCTGACCACCGATATCGCACCGG GCTATGATCACATCACTTCCGGCATCGGCGCCGCGATGATCGGCTGGTTCGGCTGCGCGATGCTGTGCTACGTCACGCCG AAGGAGCATCTCGGCCTGCCCGACCGCAATGACGTCAAGACCGGCGTGATCACCTACAAGATCGCCGCCCACGCCGCCGA CCTCGCCAAGGGCCACCCCGCCGCCCAGCTCCGCGACGACGCACTCTCCCGTGCAAGGTTCGAATTCCGCTGGCAGGACC AGTTCAATCTCGGCCTCGATCCGGACACGGCGCAGGCCTTCCACGACGAGACCCTACCGAAGGACGCCCACAAGGTCGCG CATTTCTGCTCGATGTGCGGCCCGAAATTCTGCTCGATGAAGATCACGCAGGACGTCCGCGACTACGCCGCCGGCCTCGG CGACAACGAGAAAGCCGCCCTCTACCCGGTCGGCCACGCCGGCATGACCATCTCCGGCACCATCGAAGACGGCATGGCCC AGATGAGCGCCAAGTTCAAAGAGATGGGAAGCAGCGTGTATCTCGATGCCGACAAGGTGAAAGAGAGCAACAAGGCGCTG TCGTAA Protein sequence : MNIRSNPETTRAAVTTGALPSSKKIYATPASAPDLRVPLREIILSEGAGEPNLPVYDTSGPYTDPTVVIDVNKGLPRPRT EWVKQRGGVEQYEGRDIKPEDNGNVGAAHAAKAFTAHHQPLRGISDAPITQYEFARRGIITKEMIYVAERENLGRKQQLE RAEAALADGESFGAAVPAFITPEFVRDEIARGRAIIPANINHGELEPMIIGRNFLTKINANIGNSAVTSSVEEEVDKMVW AIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCEGDPVKLTWELYKDTLIEQAEQGVDYFTIHAGVRL QYIHLTASRVTGIVSRGGSIMAKWCLAHHKESFLYTHFDEICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGE LTKIAWAKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP KEHLGLPDRNDVKTGVITYKIAAHAADLAKGHPAAQLRDDALSRARFEFRWQDQFNLGLDPDTAQAFHDETLPKDAHKVA HFCSMCGPKFCSMKITQDVRDYAAGLGDNEKAALYPVGHAGMTISGTIEDGMAQMSAKFKEMGSSVYLDADKVKESNKAL S |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 65 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 65 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 63 |
