Gene Information

Name : Rpal_3680 (Rpal_3680)
Accession : YP_001992655.1
Strain : Rhodopseudomonas palustris TIE-1
Genome accession: NC_011004
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 3931041 - 3931442 bp
Length : 402 bp
Strand : +
Note : PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: nha:Nham_3726 transcriptional regulator, MerR family

DNA sequence : 
ATGCAGGCGGACCATCTCGCAATCGGCGATCTCGGACGTCAGACCGACACCAAGGTCGAAACCATCCGGTATTACGAGCG
GATCGGACTGCTGTCGGCCCCGGCGCGCACGCCGGGCAACTACCGCGCCTACACGACCGAGCATCTGAACCGGCTTAGCT
TCATCCGTCGCGCGCGCGACCTCGGCTTTTCACTCGACCAGATCCGCGCGCTGCTCGATCTGTCTGACGACCGCACCCGA
TCCTGCGATGCCATCGACGCCATCGCCAAGCAGCATTTGGCCGAAGTCGACCGCAAGATCGCCGACCTCAAGGCCCTGCG
CCACGAGTTGAACCACATGATCACCCAATGCAGCTGCGGAACGGTCGCAGACTGCCGCATTATCGAGGCGCTGTCGCCGT
AG

Protein sequence : 
MQADHLAIGDLGRQTDTKVETIRYYERIGLLSAPARTPGNYRAYTTEHLNRLSFIRRARDLGFSLDQIRALLDLSDDRTR
SCDAIDAIAKQHLAEVDRKIADLKALRHELNHMITQCSCGTVADCRIIEALSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpal_3680 YP_001992655.1 MerR family transcriptional regulator BAC0058 Protein 9e-26 44
Rpal_3680 YP_001992655.1 MerR family transcriptional regulator BAC0190 Protein 4e-29 42
Rpal_3680 YP_001992655.1 MerR family transcriptional regulator BAC0301 Protein 1e-20 41