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Name : Rpal_3589 (Rpal_3589) Accession : YP_001992564.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Unknown Product : deoxyribodipyrimidine photo-lyase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0415 EC number : 4.1.99.3 Position : 3838969 - 3840420 bp Length : 1452 bp Strand : + Note : PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: bbt:BBta_4932 DNA photolyase class-1 family protein DNA sequence : GTGCTGACACCTGCCAGCTCCCGCCCCATCATCGTCTGGTTTCGTGACGATCTCCGTCTTGCCGATCATCCGGCGCTGCA CGCAGCCGCGCAATCCGGTGCGCCTGTGCTGTGCGTCTATGTGCTCGACGAGGTGAGCGACGACGTGCGCGCCCTTGGCG GCGCCGTGCGGTGGTGGCTGGCGCAATCGCTTCGCGCGCTGGAGTCCGACCTTCGCGCTTTGGGCGGAGCGCTGATCCTG CGGCGGGGGCCAGCCGCCGCGGTGCTGGCCGAGCTGGCGCAGCAGCACGATGCGGCGGCGGTGCATTGGAACGAAATCGA GATCGCTGCGCATCGGGCGGTCGCCGATGCGCTGGCCGACGCGCTCACGGTGGCCGGCATCGCGTATCACCGCCACCGCG GCGATACGCTGGTGGAGCCGAGTGCGATCCGCAGCAAAGACGGCCGCGGCATGCGGGTGTTCACGCCGTTCTGGCGGCGT GTGCTCAGCCTCGGCGATCCACCGCAGCCCCTGCCCCGCCCGACGACGTTGCGGCCGGCGCCGGCTCCACCGAGTGATCA GCTCGGCGACTGGCAGCTCGAGCCGACGGCGCCGGACTGGGCCGGCGGCCTGCGCCAAACCTGGACGCCTGGCGAAGCCG CCGCGCAGGCGCGACTGTCCGACTTCCTCGCGGGCCTGCCCGGCTATGCGGACGGGCGCGACTATCCGGATCGGCACATC ACCTCCGGCCTGTCACCGCATCTGCGGTTCGGCGAAATCAGTCCGCGCCAGGTCTGGTACGCCGCGCGCTTTGCCGCCGC CGAGCGGCCGGCGATCGCACCCGACATCGACAAGTTCCTGAGCGAGCTCGGCTGGCGCGAGTTCTGCCGGCACCTGCTCT TCGACCATCCGGATCTGGCGACCCGCAATCTGCAGCCGGCATTCGACGCCTTCCCGTGGCAGAGCGACGACGCTGTGCTG ACCGCCTGGCAGCGCGGCCGTACCGGCTATCCGATCGTCGACGCCGGAATGCGCGAACTGTGGCACTCCGGGGTGATGCA TAATCGCGTCCGCATGGTCGTCGGCTCGTTCCTGGTCAAGCACCTGCTGATCGACTGGCGGCTCGGCGAACAGTGGTTCT GGGACACGCTGGTGGACGCCGACCCCGGCAGCAATCCCGGTAACTGGCAGTGGGTGGCGGGCTGCGGCGCCGATGCGGCA CCGTATTTCCGCGTGTTCAACCCGGTCCTGCAGAGCGAGAAGTTCGACGCGGGTGGCGCCTACATCCAGCGCTGGGTGCC CGAGCTGGCCGGGCTGCCGAACGACCTGATCCACCAGCCTTGGACCGCGACGCCGCTCGAACTCGCCGCCGCCGGCATCG AGCTCGGCGGCAACTACCCGGGACCGATCGTCGACCACAAAACCGGCCGGCAGCGGGCGCTTTCGGCCTATGCCGAGCTG CGTCAGCGTTGA Protein sequence : MLTPASSRPIIVWFRDDLRLADHPALHAAAQSGAPVLCVYVLDEVSDDVRALGGAVRWWLAQSLRALESDLRALGGALIL RRGPAAAVLAELAQQHDAAAVHWNEIEIAAHRAVADALADALTVAGIAYHRHRGDTLVEPSAIRSKDGRGMRVFTPFWRR VLSLGDPPQPLPRPTTLRPAPAPPSDQLGDWQLEPTAPDWAGGLRQTWTPGEAAAQARLSDFLAGLPGYADGRDYPDRHI TSGLSPHLRFGEISPRQVWYAARFAAAERPAIAPDIDKFLSELGWREFCRHLLFDHPDLATRNLQPAFDAFPWQSDDAVL TAWQRGRTGYPIVDAGMRELWHSGVMHNRVRMVVGSFLVKHLLIDWRLGEQWFWDTLVDADPGSNPGNWQWVAGCGADAA PYFRVFNPVLQSEKFDAGGAYIQRWVPELAGLPNDLIHQPWTATPLELAAAGIELGGNYPGPIVDHKTGRQRALSAYAEL RQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0113 | NP_938509.1 | riboflavin biosynthesis protein | Not tested | Not named | Protein | 4e-66 | 44 |
| CD241_0111 | YP_005124380.1 | putative riboflavin biosynthesis protein | Not tested | Not named | Protein | 6e-67 | 44 |
