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Name : Rpal_2936 (Rpal_2936) Accession : YP_001991919.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Resistance Product : DEAD/DEAH box helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 3204835 - 3206937 bp Length : 2103 bp Strand : - Note : PFAM: helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: nha:Nham_2055 DEAD/DEAH box helicase-like DNA sequence : ATGCGCCCTGCTCTACTCAATCCATTGTTCGCGCCGGTCACCAGCCTGACTGGCGTCGGGCCGAAACAGGACAAGCTGTT CCGCTATCTGCTGGACCGCGACGACACTCCGCGGCTGGCCGATTTGCTGCTGCATCTGCCGACCAGTGTGATCGACCGCC GCGCCCGACCCAAGATTCGCGACGCGGTGCCGGGCACCGTGGTGACCCTGGAGGTCACGGTCGATCGCCACCGCGCGCCG CCGCCAGGCCGCTCGCGCGCGCCGTATCTGGTCTATGCCAGCGACGACACCGGCGACGTGGTGCTGACGTTCTTCCGCGC CAAGCCTGACTTTGTGCAGAAACTGCTGCCGGTCGGCGCCAAACGCTACATCTCCGGCACCGGCCAGCTCTACGACGGCA CACTGCAGATCGTGCATCCGGACCGCGTCGTCGACGAGGAAGGCTTCGCCAAGCTGCCGCAGATCGACCCGGTGTATCCG CTGACCGAGGGGCTGGCGATCGGCTCGCTGCGCCGGGCGGTCGCGCAGGCTCTGACCAAGCTGCCGGCGCTGCCGGAGTG GATCAGCCCCGAGGTGCTGCGGCGCTGCCGGTTTCCCTCGTTCGCCGATGCGCTGAAACACGTCCACATCCCGGATCAGC CAACCGACATTCTGCCGGACGGGCCATATTGGTCGCGCCTTGCCTATGACGAACTGCTCGCCGGGCAGCTCGCCCTGGCG CTGGTGCGGGCGCAACTCCGTCGCCCGGCCGGCAGCCGCAACGCCGGCGATGGACGGCTGCGCCACAAGATCATCGACGC GCTGCCCTACGCGTTGACCAACTCGCAGCAGCAGGCCGCCGCGGCGATCGCCGAAGATCTGCGCCAACCGGTGCGGATGC TGCGATTGCTGCAGGGCGACGTGGGAAGCGGCAAGACCGTGGTGGCGCTGCTGGCGGCTGCAGCCGTCGCCGAGGCCGGC AAGCAGGCGGCGCTGATGGCACCGACGGAAATCCTCGCCCGCCAGCACATCAAGACCATCGCGCCGCTCGCCGACCGCGC CGGAATGCAGGTCGCAATCCTCACCGGCCGCGAAAAAGGCAAGGAACGCCGAGAGATCCTGGAGCGGCTTGCCGCCGGCG AGATCGATTTTCTGGTCGGCACCCACGCGCTGATCCAGGACGACGTGATCTACAAATCGCTGGCGCTGGCGGTCGTTGAT GAACAGCATCGCTTCGGCGTCCGCGAGCGGCTGGCGCTGACCAGTAAGGGCGCCGATGTCGACGTGCTGGTGCTCAGCGC GACGCCGATTCCGCGAACACTGGTGCTGACTTACTTCGGCGACATGGACGTCTCGGAACTGCGCGAGAAGCCCGCCGGCC GCCAACCGATCGACACCCGCACGCTGTCCGACACGCGGCTGCCAGAGGTGATCGACGGCATCGGCCGCGCCATCGCCACC GGCAAGCGGGTGTACTGGATCTGCCCGCTGGTGGAAGAATCCGAGAACGTCAAACTCACCGACGCCGAGCAACGTTTCGA ATCGCTGCGACAGCGTTTCGGTGATCATCAGGTTGGGCTGGTGCACGGACGGATGCGCGGCAGTGACAAGGACCTCGTGA TGGGCCAGTTCGCGCGCGGCGAAATCAGCGTGCTGGTCGCGACGACAGTTGTCGAAGTCGGCGTCGACGTGCCCGAAGCC AGCATCATGGTGATCGAAAACGCCGAGCGGTTCGGCCTGGCGCAGTTGCATCAGCTGCGCGGGCGGATCGGTCGCGGCAG CGAAGCCTCCACCTGCCTGCTGCTGTACCGCGAGCCGCTGGGTGAGCTTTCGGGGGCACGCTTGCGAGTGATCCGCGACA CCACCGACGGTTTCCGGATCGCCGAGGAAGACCTGAAGCTTCGCGGCGAAGGCGACGTGCTCGGCACAAGGCAGAGCGGC CTGCCCGGCTACCGGATCGCGCGCTCAGAAGTTCACGCCCAGCTCATCACCCAGGCGCGCGACGAAGCGCTGCGCATCCT GAAGGACAATCCGAAACTCGAAGGTCCGTCCGGCGAAGCGCTGCGTTGCCTGCTGTATCTCTACGAACGCGACGAAGCGA TCCCGCTATTAGGTGCGGGTTAG Protein sequence : MRPALLNPLFAPVTSLTGVGPKQDKLFRYLLDRDDTPRLADLLLHLPTSVIDRRARPKIRDAVPGTVVTLEVTVDRHRAP PPGRSRAPYLVYASDDTGDVVLTFFRAKPDFVQKLLPVGAKRYISGTGQLYDGTLQIVHPDRVVDEEGFAKLPQIDPVYP LTEGLAIGSLRRAVAQALTKLPALPEWISPEVLRRCRFPSFADALKHVHIPDQPTDILPDGPYWSRLAYDELLAGQLALA LVRAQLRRPAGSRNAGDGRLRHKIIDALPYALTNSQQQAAAAIAEDLRQPVRMLRLLQGDVGSGKTVVALLAAAAVAEAG KQAALMAPTEILARQHIKTIAPLADRAGMQVAILTGREKGKERREILERLAAGEIDFLVGTHALIQDDVIYKSLALAVVD EQHRFGVRERLALTSKGADVDVLVLSATPIPRTLVLTYFGDMDVSELREKPAGRQPIDTRTLSDTRLPEVIDGIGRAIAT GKRVYWICPLVEESENVKLTDAEQRFESLRQRFGDHQVGLVHGRMRGSDKDLVMGQFARGEISVLVATTVVEVGVDVPEA SIMVIENAERFGLAQLHQLRGRIGRGSEASTCLLLYREPLGELSGARLRVIRDTTDGFRIAEEDLKLRGEGDVLGTRQSG LPGYRIARSEVHAQLITQARDEALRILKDNPKLEGPSGEALRCLLYLYERDEAIPLLGAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 9e-150 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpal_2936 | YP_001991919.1 | DEAD/DEAH box helicase | BAC0356 | Protein | 2e-97 | 44 |
