Gene Information

Name : Rpal_0288 (Rpal_0288)
Accession : YP_001989324.1
Strain : Rhodopseudomonas palustris TIE-1
Genome accession: NC_011004
Putative virulence/resistance : Unknown
Product : alanine racemase domain-containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 306916 - 307575 bp
Length : 660 bp
Strand : -
Note : PFAM: alanine racemase domain protein; KEGG: bbt:BBta_0174 exported protein of unknown function

DNA sequence :
ATGAGCGCCGCAGCCAATCTGGCCGCGGTCGAGGCCGAAATCGCCTGTGCCTGCAAGGATGCACGGCGCGAGCGCAGTGA
GGTGACGCTGATCGCAGTGTCGAAGACCTTCGAGGCGGAGGCGATCCGCCCGGTGCTGTCGGCAGGCCAGCGCGTGTTCG
GCGAAAACCGCGTGCAGGAAGCCAAGGGTAAATGGCCGGCGCTGGTCGACGAATACCCTGGCACCGAATTGCATCTGATC
GGACCGCTGCAGTCCAACAAGGCCAAGGATGCTGTCGGGCTGTTCGGTGCGATCCATTCGGTCGATCGTGACAGCCTGTG
CGAAGCCCTGAGCAAGGTGCTGCCGCAGGCTGGCCGAAAGGTCGAACTGTTCGTTCAGATCAACACCGGCGAGGAGCCGC
AGAAGGCGGGCATCGCGCCGCAGGATGCCGATGCCTTTCTGGTCGCTTGCCGCGAGCGCTGGGGGCTGACCATCAGCGGA
CTGATGTGCATCCCACCGGTCGATGAAGCGCCGGCGCCGCATTTCGCGCTATGCGCGAAGATCGCCAAGCGCAATGGCCT
TGCGAAGCTGTCGATGGGCATGAGCGCCGACTTCGCCACCGCCATCCAATTCGGCGCCACCCATGTGCGGGTGGGGTCGG
CGATCTTCGGGCATCGCTGA

Protein sequence :
MSAAANLAAVEAEIACACKDARRERSEVTLIAVSKTFEAEAIRPVLSAGQRVFGENRVQEAKGKWPALVDEYPGTELHLI
GPLQSNKAKDAVGLFGAIHSVDRDSLCEALSKVLPQAGRKVELFVQINTGEEPQKAGIAPQDADAFLVACRERWGLTISG
LMCIPPVDEAPAPHFALCAKIAKRNGLAKLSMGMSADFATAIQFGATHVRVGSAIFGHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-21 41
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-21 41
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 3e-21 41
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-21 41