Gene Information

Name : Rpal_2893 (Rpal_2893)
Accession : YP_001991876.1
Strain : Rhodopseudomonas palustris TIE-1
Genome accession: NC_011004
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 3155783 - 3156562 bp
Length : 780 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bbt:BBta_7645 sulfonate ABC transporter ATP binding protein

DNA sequence :
ATGCTGGTGCTCGACGGCGTCGACAAGACCTACCCCAACGGCGTTCACGCCCTGCAATCGTTCTCCGCGAGGGTCAATCT
CGGCGAGATCGTCGCGGTGATCGGCGGCTCGGGCTGCGGCAAGTCGACCTTGCTGCGGGCGATCGCCGGTCTCGATCGGG
CGACCGCCGGCACCATTGTGCTGGACGGCGAAACCATCACGGCGCCGCACCCTAAGATCGGCATCATTTTTCAGGAACCA
CGGCTGCTGCCATGGCTGAGCGTCGCCGACAACGTCGGCTTTGGTCTCGAACAGCTGCCGCGATCGGACCGCCACGCTCG
CGTCGCCGCCGCACTTGCCCGAGTGGGACTGGCCGACAAGGCGAAGGCGTGGCCCCGCGAACTGTCTGGCGGCCAAGCCC
AGCGCGTTGCGATCGCACGGGCGCTAGTGCCGCAGCCGGAAGTCATTCTGCTCGACGAGCCGTTCTCGGCGCTCGACGCT
TTCACCCGCGCCGATCTGCAGGATCACCTGCTCGATCTCTGGGCCGATACCCGGCCGACGCTGATCCTGGTGACCCACGA
CGTCGAGGAAGCCGTGGCGCTCGCCAATCGCGTCTTGGTGATGCGGCCGAGGCCGGGACGGCTGTTCGAGGAAATAGCGG
TCGACCTGCCGCGTCCACGCCACCGCACCTCGGCGGCGTTCGAAGACCTCAAGCACGCCATCCTGCATTCACTCGATCGC
TCGCTGCAGCGGACCGGACGCCGGGCCGACGATTTGCTCGTCGAGGGCGCCGGGATATAA

Protein sequence :
MLVLDGVDKTYPNGVHALQSFSARVNLGEIVAVIGGSGCGKSTLLRAIAGLDRATAGTIVLDGETITAPHPKIGIIFQEP
RLLPWLSVADNVGFGLEQLPRSDRHARVAAALARVGLADKAKAWPRELSGGQAQRVAIARALVPQPEVILLDEPFSALDA
FTRADLQDHLLDLWADTRPTLILVTHDVEEAVALANRVLVMRPRPGRLFEEIAVDLPRPRHRTSAAFEDLKHAILHSLDR
SLQRTGRRADDLLVEGAGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-37 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpal_2893 YP_001991876.1 ABC transporter NC_008702.1.4606598. Protein 4e-20 42