|
Name : Rpal_2568 (Rpal_2568) Accession : YP_001991556.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2773946 - 2775406 bp Length : 1461 bp Strand : + Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bra:BRADO0028 succinate-semialdehyde dehydrogenase [NADP+] (SSDH) DNA sequence : ATGATCGAGATGCTGATGCCGAGTGATCCCGGCCTGTTGGCCGAGCGCTGCCTGATTGGCGGCAAGTGGTGTGGTGAGCC GGTCGATGCCGTGTTCAATCCGGTGACCGGTGAACGCATCGGCGCGGTGCCGCGGTTTGGCACCGACGAAGCCGAGGAGG CGGTGCGTGCCGCCGAGATCGCGTTCCGGCAGTGGTCGAAGCTGCTCGCCAAGCAGCGCGCCACGATGCTGCGCGCGTGG TTCGATCAGATCATCGCTAACCGCGACGATCTGGCGCTGCTGCTGACGCGCGAGCAGGGCAAGCCGCTCGCCGAAGCGCT CGGTGAAATCGACTACGCGGCATCGTTCGTTGAGTTCTACGCCGAGGAGGCGCGGCGCATCTACGGCGAAACAATTCCGT CGCATCGCGCCGACGCCCGCACGATGGTGATCCGACAGCCGGTTGGTGTCGTCGCGGCGATCACGCCGTGGAACTTCCCC GCCGCGATGATCACCCGCAAAGTTGCGCCGGCGCTTGCCGCCGGCTGCACCGTGGTGATCAAGCCGGCGCCGGAAACGCC GCTCACCGCGCTGGCGCTCGGTGTGCTGGCGCAGCGTGCCGGCTTTCCGCCGGGCGTGCTCAACATCATCACCGGCGATG CGCCGGCGATCGGCAAGGCGTGGACCGAGCATCCGACGGTGCGGGCGATCAGCTTCACCGGCTCGACCGAGGTCGGCAAG ATCCTGATGCGCCAGGCCGCCTCGACCGTGAAGAAGGTCGCGCTCGAACTCGGCGGCAACGCGCCCTTCATCGTGTTTGA CGATGCCGATCTCGATGCTGCGGTCGAAGGTGTGATCGCCTCGAAGTTCCGCAACATGGGGCAGACCTGCGTCTGCGCGA ACCGCATCTACGCCCAGGACGGGATCTACGACGCCTTCGTCGAGAAGCTCACCGCCAAGGTGGCGACGCTGCAGGTCGGC AACGGTGTCGATGCCGGCGTGACCCAGGGGCCGCTGATCACCACCGAAGCGATCGCCAAGGTCGAGCGTCATGTGTCCGA CGCGGTCGCCAAGGGCGCCAAGGTCGTACTCGGCGGCAAGCGGCACAAACTGGGGCGCACCTTCTTCGAGCCGACCGTGC TCGCCGGCGTCACCACAGCGATGCTGATCACGCGCGAAGAGACCTTCGGCCCGGTGGCGCCGGTGTATCGCTTCACCGAC GAAGCCGACGTGATCGCGCAGGCGAACGACTCGCCGTTCGGCCTGGCGTCCTACTTCTACGCACGCGACCTCGGACGCGT ATTCCGCGTCGCCGAGGCGCTGGAGTCCGGCATGGTCGGCGTCAACTCGGCGCTGCTCGGCGCCGACGTGGTGCCGTTCG GCGGCGTCAAGCAGTCCGGCCTCGGCCGCGAGGGTTCGCGCCACGGCATCGAGGAATACGTCGAGACCAAATATATCCTG CTCGGCGGTCTCGATCGCTGA Protein sequence : MIEMLMPSDPGLLAERCLIGGKWCGEPVDAVFNPVTGERIGAVPRFGTDEAEEAVRAAEIAFRQWSKLLAKQRATMLRAW FDQIIANRDDLALLLTREQGKPLAEALGEIDYAASFVEFYAEEARRIYGETIPSHRADARTMVIRQPVGVVAAITPWNFP AAMITRKVAPALAAGCTVVIKPAPETPLTALALGVLAQRAGFPPGVLNIITGDAPAIGKAWTEHPTVRAISFTGSTEVGK ILMRQAASTVKKVALELGGNAPFIVFDDADLDAAVEGVIASKFRNMGQTCVCANRIYAQDGIYDAFVEKLTAKVATLQVG NGVDAGVTQGPLITTEAIAKVERHVSDAVAKGAKVVLGGKRHKLGRTFFEPTVLAGVTTAMLITREETFGPVAPVYRFTD EADVIAQANDSPFGLASYFYARDLGRVFRVAEALESGMVGVNSALLGADVVPFGGVKQSGLGREGSRHGIEEYVETKYIL LGGLDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-137 | 60 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-78 | 43 |
| unnamed | AAK01506.1 | putative aldehyde dehydrogenase | Not tested | PAGI-1 | Protein | 1e-64 | 41 |
