Gene Information

Name : Rpal_0191 (Rpal_0191)
Accession : YP_001989229.1
Strain : Rhodopseudomonas palustris TIE-1
Genome accession: NC_011004
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 208995 - 209738 bp
Length : 744 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bja:blr0460 probable ABC transporter ATP-binding protein

DNA sequence : 
ATGGACAGTCTCATTGAACCCTCGTCATTGGCCGGCGGCGCGCCGGACAGCATCGCGATCTCCAACGTCAACCTGTCGCT
GGGCAGCGGTGCCGCGCGGGTGCACATCCTCAAGGATATCAGCCTGCGCGTCGGCGCCGGCGAGACGATCGGGCTGATCG
GCCCGTCCGGCTCCGGCAAATCCACCCTGCTGATGGTGATGGCCGGGCTGGAGCGGCCCGACAGCGGTCAGGTGGTGGTG
GACGGCACCTCATTCAATGGTTTGGACGAGGACGCGCTGGCCCGCTTCCGCGGCCGCCAGATCGGAATCGTGTTTCAGTC
CTTCCATCTGATCCCGACCATGACGGCGCTCGAAAACGTCGCGGTGCCGCTGGAGCTGGCCGGTCAGGCTGGTGCCGCGG
ACCGCGCTGCCCGCGAGCTGACCTCGGTCGGCCTCGGCGAACGGCTGCACCATTACCCGTCCCAGCTCTCCGGCGGCGAG
CAGCAGCGCGTCGCGCTGGCCCGTGCGCTCGCGCCCGATCCGGCGATCCTGGTGGCCGATGAGCCGACCGGCAATCTCGA
CGAGACCACCGGCAAGCAGATCGTCGACCTGTTGTTCGCCAAGCATGCCGAGCGCGGCATGACGCTGGTGCTGGTGACGC
ACGATTCCGCATTGGCGCAGCGCTGCGACCGGGTGGTGCGGCTGCGCTCGGGGCGGATCGACACCACGCAGCCGGGCTCC
GCCGCACGCGCACGGTCGGCCTGA

Protein sequence : 
MDSLIEPSSLAGGAPDSIAISNVNLSLGSGAARVHILKDISLRVGAGETIGLIGPSGSGKSTLLMVMAGLERPDSGQVVV
DGTSFNGLDEDALARFRGRQIGIVFQSFHLIPTMTALENVAVPLELAGQAGAADRAARELTSVGLGERLHHYPSQLSGGE
QQRVALARALAPDPAILVADEPTGNLDETTGKQIVDLLFAKHAERGMTLVLVTHDSALAQRCDRVVRLRSGRIDTTQPGS
AARARSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpal_0191 YP_001989229.1 ABC transporter NC_008702.1.4606598. Protein 2e-33 47
Rpal_0191 YP_001989229.1 ABC transporter NC_012469.1.7686878. Protein 1e-37 45
Rpal_0191 YP_001989229.1 ABC transporter CP001581.1.gene798.p Protein 9e-38 44