Gene Information

Name : Rpal_1399 (Rpal_1399)
Accession : YP_001990414.1
Strain : Rhodopseudomonas palustris TIE-1
Genome accession: NC_011004
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1472331 - 1473851 bp
Length : 1521 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase_; KEGG: mlo:mll6639 aldehyde dehydrogenase

DNA sequence :
ATGAACCTCATCACAACGATGCATCCTGACGCCAGCACAGTCTTCAAGGCCCGCTATGGCAACTTCATCGGCGGCCGCTG
GGTTGCGCCGGTCGATGGCAGATACTTCGACAACACCACGCCGATCACCGGCGCAAAACTGACGGAAATTCCGCGTTCGC
AGAAGGAAGACGTCGAACTCGCGCTTGATGCAGCGCACACCGCGAGCGTCACCTGGAGCAAGACCACGACGACAGAGCGG
TCACTCATTCTCAATCGCATCGCCGATCGGATGGAAGCCAATCTCGATCTGCTGGCGATCGCCGAGACGCTCGACAACGG
CAAGCCGATCCGCGAGACGCGGGCCGCCGACCTGCCGCTGGCGATCGATCACTTCCGCTATTTCGCAGGTGCACTGCGCG
CGCAGGAAGGTTCGATCTCGGAGATCGATCACGACACCATCGCGTATCACTTCCACGAGCCGCTCGGCGTCGTCGGCCAG
ATCATTCCGTGGAACTTCCCGTTGCTGATGGCCGCCTGGAAGCTGGCGCCGGCACTCGCCGCCGGCAACTGCGTGGTGCT
GAAACCGGCCGAGCAGACCCCGGCCTCGATCCTGGTATGGGCCGAACTGGTCGGCGATCTGTTGCCTCCCGGCGTCGTCA
ACGTCGTCAACGGCTTCGGCGTCGAAGCCGGCAAGCCGCTGGCGTCCAGCCCGCGCATCGCCAAGATCGCCTTCACCGGC
GAGACCTCGACCGGGCGGCTGATCATGCAATATGCAAGCGAGAATCTGGTGCCGGTGTCACTGGAACTCGGCGGCAAATC
GCCGAACATTTTCTTCGGCGACGTCACTGCCGAAGACGACCCATTCTTCGACAAGGCGATCGAAGGCTTCGTGATGTTCG
CGCTCAATCAAGGCGAAGTCTGCACCTGCCCGAGCCGCGCGCTGGTGCAGGAATCGATCTACGATCGCTTCATGGAGCGG
GCGCTCGCCCGCGTCGCCGCGATCCGGCAGGGCGATCCGCGCGATCCGGCAACGATGATCGGTGCGCAGGCGTCTCAAGA
GCAGCTCGACAAGATCCTGTCCTACATCGACATCGGTCGGCACGAAGGTGCCGAACTGCTGGCCGGCGGCGGGCGGGCGC
AGCTGCCCGGCGATCTCGCCGGTGGCTACTACGTGCATCCGACCGTGTTCCGCGGCCACAACCAGATGCGGATCTTCCAG
GAGGAGATCTTCGGCCCCGTGGTGTCGGTCACCACCTTCAAGGACGAAGCCGAAGCGATCGCCATCGCGAACGACACCCA
GTACGGACTCGGCGCAGGCGTCTGGACGCGGGACGGCACTCGCGCCTATCGGTTCGGACGCGCCATCGCTGCGGGCCGGG
TGTGGACCAATTGCTACCACGCCTATCCGGCGCATGCCGCCTTCGGCGGCTACAAGCAGTCCGGCATCGGGCGTGAGACC
CACAAGATGATGCTCGATCACTATCAGCACACCAAGAACCTGCTGGTGAGCTACGGCACCGGCCCACTCGGCTTCTTCTA
G

Protein sequence :
MNLITTMHPDASTVFKARYGNFIGGRWVAPVDGRYFDNTTPITGAKLTEIPRSQKEDVELALDAAHTASVTWSKTTTTER
SLILNRIADRMEANLDLLAIAETLDNGKPIRETRAADLPLAIDHFRYFAGALRAQEGSISEIDHDTIAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPASILVWAELVGDLLPPGVVNVVNGFGVEAGKPLASSPRIAKIAFTG
ETSTGRLIMQYASENLVPVSLELGGKSPNIFFGDVTAEDDPFFDKAIEGFVMFALNQGEVCTCPSRALVQESIYDRFMER
ALARVAAIRQGDPRDPATMIGAQASQEQLDKILSYIDIGRHEGAELLAGGGRAQLPGDLAGGYYVHPTVFRGHNQMRIFQ
EEIFGPVVSVTTFKDEAEAIAIANDTQYGLGAGVWTRDGTRAYRFGRAIAAGRVWTNCYHAYPAHAAFGGYKQSGIGRET
HKMMLDHYQHTKNLLVSYGTGPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-121 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-127 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-127 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-127 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-126 64
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 9e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpal_1399 YP_001990414.1 aldehyde dehydrogenase VFG0082 Protein 3e-121 64