Gene Information

Name : Rpal_1327 (Rpal_1327)
Accession : YP_001990342.1
Strain : Rhodopseudomonas palustris TIE-1
Genome accession: NC_011004
Putative virulence/resistance : Unknown
Product : L-lactate transport
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1620
EC number : -
Position : 1398065 - 1399729 bp
Length : 1665 bp
Strand : +
Note : TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: bra:BRADO6118 glycolate permease (LctP family)

DNA sequence :
GTGTGGAATCAAATCTATAATCCACTTGGCAGCGCCGCTTTGTCGACCCTGGCGGCGGCCGTTCCCGTGGTCACGCTGCT
GGTGCTGATCGCGAGCGGCAAGGTGAAGGCTCACCTCGCCGCGATTATCGCTCTGGTGCTCGCCAATGCGGTGGCGATCT
TCGTATTTACGATGCCGGCCAACATGTCGGTGCGCGCCTCGCTACTCGGTGTCGTCACCGGCTTCTTTCCAATCGGCTGG
ATCGTTCTCAACGTCATCTTTCTCTATCGGGTCACCGTGGCTACCGGCCGGTTCGAGTTGCTGCAGCGGGCGATCGGCGG
TGTCACCACCGACCGTCGGCTGCAGCTACTCCTGATCGCGTTTGCGTTTGGCGCATTCTTCGAAGGTGCATCCGGGTTCG
GCACGCCGGTCGCGATCACCGGTGCCGTGCTGATCGGCCTCGGCTTCTCGCCGCTCGCCGCCTCGGGCCTGTCGCTGATC
GCCAACACCGCGCCGGTCGCCTACGGGGCGCTCGGCACGCCGATTCAGGGCCTCGCCTCGGTCACCGGGCTGGATCCCTA
CATCCTCGGCGCGATGGTCGGCCGGCAACTGCCGTTCTTCTCGCTGCTGGTGCCGTTCTGGCTGATCTGGGCGTTCGCGG
GCTTCCGCGGCATGATGCAGATCTGGCCGGCGATCCTGGTCACCGGCGTGTCGTTCGCGGTCCCGCAATTCCTGATCTCG
AACTACATCAATCCCTGGATCGTCGACATCGGCGCCTCGCTGATCTCGATGGGCTGCCTGATCCTGTTCCTGAAAGTGTG
GCAGCCGAAAGAGCTGTGGCTGTCGCCGAAGCTGCGCAGCCACGATCCCTCCACCGAAACCATGGCCCCGCCGAAAGAGC
TAAGCCGGGCTCCGCTGACGCAGGCGCAGCTGTGGGGCGCGCTGCTGCCGTGGATCATTGTCTGCATCGTGATGCTGATC
TGGGGCACCGGCCTGTTCAAGAGCTGGGCGAATTCGATCTTCGTCTGGAACTATCCCGTCCCTGAACTCGACAAGATGAT
CATGAAGGTGCCGCCGGTGGCCGCGAAGCCGACGCCAGAAGGCGCGGTGTTCTCGTTCACCTATCTGTCGTTCACCGGCA
CCGGCATGTTGATCGCGGCGCTGATCTCCGGCCTCCTGATGGGCGTGTCGCCGGGCAGGATGGCGACCGAGTATGGCCGC
ACCATCAAGGTCTGCGCGATCTCGCTGATCACCATCTCGGCGATGCTGGCGATCGGCACGTTGACCCGTCTGTCCGGCGT
CGACGCGACGTTGGGCCTGGCCTTCGCGGCGACCGGCGTGTTGTATCCGTTCTTCGGCACGCTGCTCGGCTGGCTCGGCG
TGGCGCTGACCGGATCGGACACCGCCTCCAACGTGCTGTTCGGCAATCTGCAGAAGATCACCTCCGAGCAGCTCGGCCTG
TCTCCGATCCTGATGGGCGCCGCCAACTCATCCGGCGGTGTGATGGGCAAGATGATCGATGCTCAGTCGATCGTCGTCGC
GTCGACCGCGACCAACTGGTACGGCCACGAAGGCACGATCCTGCGCTACGTGTTCCTGCACTCGATCGCGCTCGCGTGTC
TGGTCGGCGTGCTGGTGATGCTGCAGGCCTATGTCTATCCGTTCACCGCAATGGTCTTGAAGTAA

Protein sequence :
MWNQIYNPLGSAALSTLAAAVPVVTLLVLIASGKVKAHLAAIIALVLANAVAIFVFTMPANMSVRASLLGVVTGFFPIGW
IVLNVIFLYRVTVATGRFELLQRAIGGVTTDRRLQLLLIAFAFGAFFEGASGFGTPVAITGAVLIGLGFSPLAASGLSLI
ANTAPVAYGALGTPIQGLASVTGLDPYILGAMVGRQLPFFSLLVPFWLIWAFAGFRGMMQIWPAILVTGVSFAVPQFLIS
NYINPWIVDIGASLISMGCLILFLKVWQPKELWLSPKLRSHDPSTETMAPPKELSRAPLTQAQLWGALLPWIIVCIVMLI
WGTGLFKSWANSIFVWNYPVPELDKMIMKVPPVAAKPTPEGAVFSFTYLSFTGTGMLIAALISGLLMGVSPGRMATEYGR
TIKVCAISLITISAMLAIGTLTRLSGVDATLGLAFAATGVLYPFFGTLLGWLGVALTGSDTASNVLFGNLQKITSEQLGL
SPILMGAANSSGGVMGKMIDAQSIVVASTATNWYGHEGTILRYVFLHSIALACLVGVLVMLQAYVYPFTAMVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcA CAE85240.1 GlcA protein, putative glycolate permease Not tested PAI V 536 Protein 1e-87 47