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Name : Rpal_1039 (Rpal_1039) Accession : YP_001990071.1 Strain : Rhodopseudomonas palustris TIE-1 Genome accession: NC_011004 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 1103274 - 1104764 bp Length : 1491 bp Strand : - Note : PFAM: Integrase catalytic region; KEGG: nha:Nham_3914 integrase, catalytic region DNA sequence : GTGGAGACGGTCGCTCGGATTCGGCGTGAGCATTTTCTCAAGGGCAAGACGATCAAGGAGATCGTCCGGGACCTGAAGGT GTCGCGGAACACGGTCCGCAAAGTGCTGCGTTCCGGTGAGACGTCATTCGAGTATGAGCGCGAAGTTCAGCCGCGACCGA AGCTTGGGCGGTGGACGGCCGAGCTGGATGAACTGCTCTCGACGAACGCCACCAAGGCAGCTCGCGAGCAGTTGACGTTG ATCCGGATCTTCGAGGAACTGCGCGGGCGCGGTTATGACGGCGGCTACGATGCCGTGCGCCGCTTCGCCCGGCGCTGGGC CAAGGAGCGCGGCCAGGCGACGGCCGCAGCTTACGTACCGCTGAGCTTCGCGCCGGGAGAAGCCTACCAGTTCGACTGGA GCCACGAGATCGTCCTGTTTGGCGGGGTGACGACGATCGTGAAGGTCGCCCACGTCCGGCTCTGCCACAGCCGGATGTTG TTCGTGCGGGCCTATCCGCGCGAGACCCAGGAGATGGTGTTCGACGCTCATGACCGGGCGTTCGCCTTGTTCAAGGGAAC CTGCGGACGCGGCATCTACGACAACATGAAGACGGCGGTGGAGACGATCTTCGTCGGCAAGGACCGTCTCTATAATCGCC GCTTCATGCAGATGTGCAGCCACTACCTGATCGAGCCGGTCGCATGCACGCCGGCGTCTGGCTGGGAGAAGGGTCAGGTC GAGAACCAGGTCGGCCTGGTGCGTGAGCGATTCTTCACGCCGCGGCTGCGTTTCAGGAGCTACGACGAGTTGAACGCCTG GCTCACGGACAAATGCATCGCCTACGCCAAAGCCCATCGCCACCCAGAGCTGACCGAGCAGACGATCTGGGAGGTGTTCG AAGCCGAGCGACCAAAGCTCGTTCCCTATGCCGGCCGGTTCGATGGATTCCACGCGGTGCCGACCTCGGTCTCGAAGACC TGCCTGGTGCGCTTCGACAACAACAAATACTCGGTCGCCGCCAGCGCGGTCGGTCGACCGGTCGAGGTGCATGCTTATGC CGACCGCATCGTCATCCGCCAGGACGGCCGCGTCGTTGCCGAACATCCTCGCTCGTTCGGTCGCGGCGAGACCACCTACG ATCCCTGGCATTACGTTCCCGTGCTGGCGCGCAAGCCGGGCGCCTTGCGCAACGGCGCGCCGTTCAAGGATTGGGTGCTA CCGGCAGCGATGGAACGCGTCAGGCGCAAGCTTGCCGGTGTTGCCGACGGCAACCGGCAGATGGTCGATATCCTCAATGC GGTGCTGACCGATGGCCTGGCGGCGGTCGAAGCCGCCTGTGTCGAGGCGATCGCGCACGGCGTCCATTCCGCCGACGTCA TCCTCAACATCCTCGCTCGCCGGCGCGATCCAGCGCCGCCGGCCAACATCCTCACCCCCGCGGCGCTGGCGCTGCGTTAC GCGCCCATCGCCGATTGTGCCCGCTACGACAACCTCCGGAGGATGGTCTGA Protein sequence : METVARIRREHFLKGKTIKEIVRDLKVSRNTVRKVLRSGETSFEYEREVQPRPKLGRWTAELDELLSTNATKAAREQLTL IRIFEELRGRGYDGGYDAVRRFARRWAKERGQATAAAYVPLSFAPGEAYQFDWSHEIVLFGGVTTIVKVAHVRLCHSRML FVRAYPRETQEMVFDAHDRAFALFKGTCGRGIYDNMKTAVETIFVGKDRLYNRRFMQMCSHYLIEPVACTPASGWEKGQV ENQVGLVRERFFTPRLRFRSYDELNAWLTDKCIAYAKAHRHPELTEQTIWEVFEAERPKLVPYAGRFDGFHAVPTSVSKT CLVRFDNNKYSVAASAVGRPVEVHAYADRIVIRQDGRVVAEHPRSFGRGETTYDPWHYVPVLARKPGALRNGAPFKDWVL PAAMERVRRKLAGVADGNRQMVDILNAVLTDGLAAVEAACVEAIAHGVHSADVILNILARRRDPAPPANILTPAALALRY APIADCARYDNLRRMV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 1e-109 | 50 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 4e-81 | 42 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 6e-85 | 41 |
