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Name : pBCA084 (pBCA084) Accession : YP_002235520.1 Strain : Genome accession: NC_011003 Putative virulence/resistance : Unknown Product : putative transposase-related protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 81408 - 82241 bp Length : 834 bp Strand : + Note : submitted as non partial; Similar to Xanthomonas campestris IS1477 transposase xcc1455 SWALL:Q8PAM6 (EMBL:AE012246) (337 aa) fasta scores: E(): 1.1e-67, 56.7% id in 328 aa. C-terminal region is similar to Ralstonia solanacearum ISRso14-transposase OrfB pr DNA sequence : GTATCGGCGATTCGGGGGAAGGTCAACATCTCCGAGCGCCGCGCCTGCCGGCTTGTCGGGCTTTCTCGCAGCGTGCTGCA TTACGACGCGAAGCCAGACCACGAGAATGAGGTGCTAGCGGCGCGTCTGGTGGAGTTGGCACACGAACGTCGTCGATTCG GCTACCGCCGATTGCACGCCCTAGTGGAACGCGAAGGCACGCACGCCAATCACAAGCGCATCTATCGCCTGTACCGTGAG GCAGGGCTGGCTGTGCGGCGCCGTCGCAAGCGCCACGGCGTAATGATTGAGCGCGAGCAACTGGCATTGCCGGGCGCCCC CAACGAGGTGTGGTCAATCGATTTCGTGATGGATGCGCTTTCCAACGGCCGGCGCGTGAAGTGCCTGACCGTCGTCGACG ACTTCACGAAAGAGGCTGTCGACATCGTTGTCGACCATGGCATCTCAGGTTTGTATGTCGCTCGGGCATTGGACCGCGCA GCTCGCTTCCGTGGCTATCCCAAGGCGGTGCGAACAGACCAGGGCCCCGAATTTACGAGCCGCGCGCTTGACCAGTGGGC GTATGCGAACGGCGTCGCTCTGAAGTTGATTCAGGCGGGCAAGCCAACGCAGAATGCGTACATCGAATCGTTCAACGGCA AGTTCCGCGACGAATGCCTTAACGAGCACTGGTTCACGACGCTCGCGCATGCTCGGGCAGTCATCGCGGCATGGCGTCAG GACTACAACGAGCAAAGGCCGCACAGCGCACTGAACTACCTTGCGCCGTCAGAGTTTGCGGCGAAACATCGGGCAACCGC GGATACTCCTGCCGCTTTCCAGGAGTTGGTTTAA Protein sequence : VSAIRGKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVELAHERRRFGYRRLHALVEREGTHANHKRIYRLYRE AGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRA ARFRGYPKAVRTDQGPEFTSRALDQWAYANGVALKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ DYNEQRPHSALNYLAPSEFAAKHRATADTPAAFQELV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 1e-73 | 75 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 9e-95 | 71 |
| EXB25 | ABD94712.1 | hypothetical protein | Not tested | ExoU island B | Protein | 3e-54 | 66 |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 2e-46 | 44 |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 2e-45 | 43 |
