|
Name : BCAS0656 (BCAS0656) Accession : YP_002154031.1 Strain : Genome accession: NC_011002 Putative virulence/resistance : Unknown Product : putative transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 716687 - 717574 bp Length : 888 bp Strand : + Note : Similar to Escherichia coli transposase insd for insertion element is2a/d/f/h/i/k SWALL:INSD_ECOLI (SWALL:P19777) (301 aa) fasta scores: E(): 1.2e-65, 60.37% id in 265 aa, and to C-terminus from codon 132 of Pseudomonas glumae transposase SWALL:O50654 (EM DNA sequence : ATGGATAGCGCACTCGCCCTCGCTGCCGGAGGACGACCAGTGAAACTGGTTTGTGAAGTTCTCGGCGTGTCGCGCTCGAA CGTATCGGCACGACTGTCGCGTCCGGCGACGTGGCGCGATGGCCGTCAATCGAGGCAGAGTGACGACGCGGCCGCGGTCG AGGAGATCCGCCGGGTCATTGGCGATTTGCCCAGCTATGGCTATCGCCGGGTTTGGGGCATCTTGCGTAACGAGCGCGTT GCGGTCGGACTGGCGCCGTTTAATGCCAAGCGAATCTATCGCGTCATGCGCACACATGGGCTGCTGATGCAGCGCCGACC GATTCCACCTCGGCCCCAACGTCGACACGACGGCAAGGTAGCCGTCGAGCGCAGCAATCAGCGATGGTGCTCGGACGGCT TCGAGTTCCGCTGCGACAACGGCGAGCCGCTGCGCGTAACGTTCGCGCTGGATTGCTGTGACCGTGAAGCGATGAGCTGG GCGGCTACGACGGCAGGCCACAGCGGCGACATCGTGCGCGACGTGATGCTGGCTGCAGTGGAAAATCGGTTTGGCATCGA GCTGCATACGCCGTCCGAAATCGAGTGGCTGAGCGACAACGGTTCGGGCTACACGGCCGACGACACGCGTCGGTTCGCAG TGGCCATCGGCCTGAAGCCATTGACCACGCCGGTATGCAGCCCGCAAAGTAACGGGATGGCCGAGAGCTTCGTGAAGACG ATGAAACGCGACTACGTCGCCTTCATGCCGAAGCCGGACGCAGCGACTGCTGCACGCAACTTGGCCATCGCGTTCGAGCA TTACAACGAGAAGCGTCCCCATAGCGCGCTGAAATACCGCTCGCCTCGCGAGTTCCGGCGCTCGATGGATTCAGCAACCT TAGTGTGA Protein sequence : MDSALALAAGGRPVKLVCEVLGVSRSNVSARLSRPATWRDGRQSRQSDDAAAVEEIRRVIGDLPSYGYRRVWGILRNERV AVGLAPFNAKRIYRVMRTHGLLMQRRPIPPRPQRRHDGKVAVERSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSW AATTAGHSGDIVRDVMLAAVENRFGIELHTPSEIEWLSDNGSGYTADDTRRFAVAIGLKPLTTPVCSPQSNGMAESFVKT MKRDYVAFMPKPDAATAARNLAIAFEHYNEKRPHSALKYRSPREFRRSMDSATLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC39284.1 | hypothetical protein | Not tested | LPA | Protein | 4e-74 | 62 |
| unnamed | AAL67379.1 | transposase-like protein | Not tested | PAI II CFT073 | Protein | 1e-72 | 62 |
| tnpF | AAD44739.1 | TnpF | Not tested | SHI-2 | Protein | 2e-72 | 61 |
| aec49 | AAW51732.1 | Aec49 | Not tested | AGI-3 | Protein | 8e-78 | 60 |
| insD | YP_002414033.1 | insertion element IS2 transposase InsD | Not tested | Not named | Protein | 4e-79 | 60 |
| SF2985 | NP_708759.1 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 6e-71 | 60 |
| S4050 | NP_839218.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 8e-79 | 59 |
| SF3708 | NP_709447.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 8e-79 | 59 |
| SF3721 | NP_709460.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 8e-79 | 59 |
| S4061 | NP_839230.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 4e-79 | 59 |
| S3189 | NP_838472.2 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 2e-78 | 59 |
| ECO111_3773 | YP_003236109.1 | putative IS2 transposase InsAB | Not tested | LEE | Protein | 3e-75 | 59 |
| unnamed | CAC39283.1 | hypothetical protein | Not tested | LPA | Protein | 9e-73 | 54 |
| c5197 | NP_757045.1 | transposase insD | Not tested | PAI II CFT073 | Protein | 4e-46 | 49 |
| insD | YP_854263.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 1e-49 | 49 |
| insD | AAZ04432.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 9e-50 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BCAS0656 | YP_002154031.1 | putative transposase | VFG1732 | Protein | 2e-79 | 60 |
| BCAS0656 | YP_002154031.1 | putative transposase | VFG0649 | Protein | 3e-71 | 60 |
| BCAS0656 | YP_002154031.1 | putative transposase | VFG0608 | Protein | 3e-79 | 59 |
| BCAS0656 | YP_002154031.1 | putative transposase | VFG0621 | Protein | 3e-79 | 59 |
