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Name : gspE (BCAL3526) Accession : YP_002232627.1 Strain : Genome accession: NC_011000 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3860953 - 3862443 bp Length : 1491 bp Strand : - Note : - DNA sequence : GTGCTCGCGTCTTCCGCCCACGACGGCGCGCCGGGCGAACGCCAGCCGCCATCGCCGCTCGCCGCGCGCCTGCTGCCGTA CGGCTTCGCGAAGAGCGGCCAGGTGCTGATCGCGCATCAGCTCGACGACACGCTCGAGGTGTGGATCAGCGAACGCACGA GCGACGCCGCGCTCGCGGAAATCGCCCGCAACTTCGGCTCGATCGCCGTGCATCGCGTGCCGGCCGACGAGCTCGCGCAG GCGATCAACCAGGCGTACGCGCGCCAGGACGGCAGCGCCGCGCAGGTGGTCGGCGAGGTCGAAGGCGAAGTCGACCTGTC GCGGCTGATGCAGGACATTCCCGAAGTCGAGGATCTGCTCGAATCGGAAGACGACGCGCCGATCATCCGGATGATCAACG CGCTGCTCACGCAAGCGGCGCGCGAACAGGCGTCGGACATTCACATCGAGCCGTTCGAAAATGCGTCGGTCGTGCGCTTT CGCGTCGACGGCACGCTGCGCGACGTCGTGCGCCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGGATCAAGATCAT GGCGCAGCTCGACATCGCGGAGAAGCGCCTGCCGCAGGACGGCCGCATCACGCTGCGCGTCGGCGGCCGGCCGGTCGACG TGCGCGTGTCGACGCTGCCGACCGGGCACGGCGAGCGCGCGGTGCTGCGTCTGCTGGAAAAGGATGCGCAGCGCCTGAAC CTCGAAGCGCTCGGGATGGGCCGCGACACGCTCGTCCAGTTCGACAAGCTAATCGGCCGCCCGCACGGCATCGTGCTCGT CACCGGCCCGACCGGTTCGGGCAAGACGACCACGCTGTACGCGTCGATGTCGCGGCTCGAAACCGCGACGACCAACATCA TGACCGTCGAGGACCCGATCGAATACGACCTGTCCGGCATCGGCCAGACGCAGGTGAACGAGCGAATCGGGATGACCTTT GCCCGCGCGCTGCGCTCGATCCTGCGCCAGGACCCGGACGTGATCATGATCGGCGAAATCCGCGACCTCGAAACCGCGCA GATCGCGGTGCAGGCGTCGCTGACGGGCCACCTCGTGCTCGCGACGCTACACACGAACGACGCGGCGTCCGCCGTCACGC GCCTGACCGACATGGGCGTCGAGCCGTACCTGCTCGCGTCGTCGCTGCTGGGCGTGCTCGCGCAGCGCCTGGTGCGCCAG CTCTGCCCGGTCTGCAAGGAAGAGCGCCACGAGGACGGCCGGACCGTGTGGCATCCGGTCGGCTGCGCGAAGTGCGGACA TTCCGGTTATGCGGGCCGGCGCGGTGTGTACGAACTGCTGGTGATCGACGATTCGATCCGCTCGCTGATTCACCGCAACG CGGCCGATGCTGAAATTCTCGCCGCCGGCCGCGCGGAAGGCATGCGCACGCTGCGCGACGACGCCGAGCGCTGGCTTGCG TCCGGCGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCATAG Protein sequence : MLASSAHDGAPGERQPPSPLAARLLPYGFAKSGQVLIAHQLDDTLEVWISERTSDAALAEIARNFGSIAVHRVPADELAQ AINQAYARQDGSAAQVVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVVRF RVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQRLN LEALGMGRDTLVQFDKLIGRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIGMTF ARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLVRQ LCPVCKEERHEDGRTVWHPVGCAKCGHSGYAGRRGVYELLVIDDSIRSLIHRNAADAEILAAGRAEGMRTLRDDAERWLA SGATSLEEVLRVTGGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-115 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-115 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_002232627.1 | type II secretion system protein E | VFG0182 | Protein | 2e-123 | 56 |
| gspE | YP_002232627.1 | type II secretion system protein E | VFG2048 | Protein | 1e-115 | 53 |
| gspE | YP_002232627.1 | type II secretion system protein E | VFG1876 | Protein | 6e-117 | 52 |
| gspE | YP_002232627.1 | type II secretion system protein E | VFG2426 | Protein | 2e-77 | 49 |
| gspE | YP_002232627.1 | type II secretion system protein E | VFG0233 | Protein | 3e-86 | 49 |
